Job Description P45541 Confidence 99.90% Date Thu Jan 5 12:03:00 GMT 2012 Rank 36 Aligned Residues 218 % Identity 13% Template c2i56A_ PDB info PDB header:isomerase, metal-binding protein Chain: A: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase from pseudomonas2 stutzeri with l-rhamnose Resolution 1.97 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.										.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																																															.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.																																															.	.	.
Query Sequence		K	Q	I	K	A	L	A	Q	T	Y	Q	M	P	I	I	G	Y	T	P	E	T	N	.	.	.	.	.	.	.	.	.	G	Y	P	Y	N	M	M	L	G	D	E	H	M	R	R	E	S	L	D	M	I	K	L	A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.																																															.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																																										.					.	.	.
Template Conservation																																																																										.
Template Sequence		K	E	L	K	A	R	G	D	A	L	G	L	G	F	D	A	M	N	S	N	T	F	S	D	A	P	G	Q	A	H	S	Y	K	Y	G	S	L	S	H	T	N	A	A	T	R	A	Q	A	V	E	H	N	L	E	C	I	E	I	G	K	A	I	G	S	K	A	L	T	V	W	I	G	.	D	G	S	N	F	P	G
Template Known Secondary structure												T											S	S			T	T		S	S			T	T		S	T	T		S	S																						T										.				S	S	T	T
Template Predicted Secondary structure																																																																										.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.
			118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure		.																																					.	.	.
Query SS confidence		.																																					.	.	.
Query Sequence		.	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	M	D	L	I	L	E	P	L	T	P	Y	.	.	.	E	S	N	V	V	C	N	A	N	D	V	L	H	A	L	A	L	V	P	S	P	R	L	F	S	M	V	D	I	C	A	P	Y	V	Q	A	E	P	V	M
Query Conservation		.																																					.	.	.
Alig confidence		.																					.																.	.	.																				.												.
Template Conservation																							.																																						.												.
Template Sequence		Q	S	N	F	T	R	A	F	E	R	Y	L	S	A	M	A	E	I	Y	K	G	.	L	P	D	D	W	K	L	F	S	E	H	K	M	Y	E	P	A	F	Y	S	T	V	V	Q	D	W	G	T	N	Y	L	I	A	Q	T	L	G	.	P	K	A	Q	C	L	V	D	L	G	H	.	H	A	P	N	T	N	I	E
Template Known Secondary structure		S	S																			T	.			T	T									S	S	S	S		S	S			T	T		S													.	T	T							G	G	G	.	S		T	T
Template Predicted Secondary structure																							.																																						.												.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.
		194	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.							.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure									.	.																											.																		.	.	.	.	.	.
Query SS confidence									.	.																											.																		.	.	.	.	.	.
Query Sequence		S	Y	F	D	K	L	G	.	.	D	K	L	R	H	L	H	I	V	D	S	D	G	A	S	D	T	H	Y	I	P	G	E	G	K	M	.	P	L	R	E	L	M	R	D	I	I	E	R	G	Y	E	G	Y	.	.	.	.	.	.	C	T	V	E	L	V	T	M	Y	M	N	E	P	R	L	Y	A	R	Q	A	L
Query Conservation									.	.																											.																		.	.	.	.	.	.
Alig confidence									.	.														.													.																		.	.	.	.	.	.							.
Template Conservation																								.																																											.
Template Sequence		M	I	V	A	R	L	I	Q	F	G	K	L	G	G	F	H	F	N	D	S	K	Y	.	G	D	D	D	L	D	A	G	A	I	E	P	Y	R	L	F	L	V	F	N	E	L	V	D	A	E	A	R	G	V	K	G	F	H	P	A	H	M	I	D	Q	S	.	H	N	V	T	D	P	I	E	S	L	I	N	S	A
Template Known Secondary structure										T	T									B		S	S	.	S	S			B		T	T	S	S																		T	T		T	T											.		S	S	S
Template Predicted Secondary structure																								.																																											.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.
		265	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	F	R	A	L	L	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	I	R	R	A	Y	A	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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