Job Description P45541 Confidence 35.63% Date Thu Jan 5 12:03:00 GMT 2012 Rank 398 Aligned Residues 153 % Identity 9% Template c1ypxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative vitamin-b12 independent methionine synthase family PDBTitle: crystal structure of the putative vitamin-b12 independent methionine2 synthase from listeria monocytogenes, northeast structural genomics3 target lmr13 Resolution 2.60 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.											.	.	.	.	.
Query SS confidence																																					.	.	.	.											.	.	.	.	.
Query Sequence		G	Y	D	G	I	E	I	W	G	G	R	P	H	A	F	A	P	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	Q	.	.	.	.	M	P	I	I	G	Y	T	P	E	T	.	.	.	.	.	N	G	Y	P	Y	N	M	M	L	G	D	E	H	M	R	R	E	S	L	D	M	I	K	L	A	M
Query Conservation																																					.	.	.	.											.	.	.	.	.
Alig confidence																																					.	.	.	.											.	.	.	.	.
Template Conservation
Template Sequence		N	L	D	G	V	E	G	Y	S	V	K	I	T	G	P	I	D	F	T	T	H	P	F	I	E	D	F	I	F	L	K	E	A	V	G	D	N	H	V	A	K	Q	T	I	P	S	P	A	X	L	H	Y	R	G	D	I	E	Y	Q	P	Y	L	D	D	A	E	K	F	A	N	D	L	A	T	A	Y	Q	K	A	I
Template Known Secondary structure		T	S																	S			T														S	S	S									T											S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.						110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		D	M	A	K	E	M	N	A	G	Y	T	L	I	.	.	.	.	.	S	A	A	H	A	G	Y	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	M	D	L	I	L	E	P	L	T	P	Y	E	S	N	V	V	C	N	A	N	D	V	L	H	A	L	A	L	V
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.																																.								.	.	.	.	.	.
Template Conservation																																																			.								.	.	.	.	.	.
Template Sequence		Q	A	F	Y	D	A	G	C	R	Y	L	Q	L	D	D	T	S	W	S	Y	L	C	S	D	E	G	F	D	P	E	T	L	Q	E	T	Y	K	N	L	I	N	E	A	I	K	H	K	P	A	.	D	X	V	I	T	X	H	.	.	.	.	.	.	I	C	R	G	G	Y	G	P	V	A	E	T	L	F	G	K	L
Template Known Secondary structure							T	T														T	T	S					S	T	T	T													T	T	T			T	.	T							.	.	.	.	.	.							S	G	G	G					T	T
Template Predicted Secondary structure																																																			.								.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.							230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	P	R	L	F	S	M	V	D	I	C	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	D	G	F	F	L	E	Y	D	N	E	R	F
Template Known Secondary structure				S								S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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