Job Description P45541 Confidence 48.52% Date Thu Jan 5 12:03:00 GMT 2012 Rank 330 Aligned Residues 156 % Identity 17% Template c1xuzA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol Resolution 2.20 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.															.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Query Sequence		L	D	M	I	K	L	A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	A	G	Y	L	T	P	P	N	V	I	W	G	R	L	A	.	.	.	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	M	D	L	I	L	E	P	L	T
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation
Template Sequence		L	K	T	A	F	E	M	V	D	A	A	Y	N	A	G	A	E	V	V	K	H	Q	T	H	I	V	E	D	E	M	S	D	E	A	K	Q	V	I	P	G	N	A	D	V	S	I	Y	E	I	M	E	R	C	A	L	N	E	E	D	E	I	K	L	K	E	Y	V	E	S	K	G	M	I	F	I	S	T	P	F	S
Template Known Secondary structure																T		S															G	G	G	G	G				T	T		S	S																										T	T									S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		P	Y	E	S	N	V	V	C	N	A	N	D	V	L	H	A	L	A	L	V	P	S	P	R	L	F	S	M	V	D	I	C	A	P	Y	V	Q	A	E	P	V	M	S	Y	F	D	K	L	G	D	K	L	R	H	L	H	I	V	D	S	D	G	A	S	D	T	H	Y	I	P	G	E	G	K	M	.	P	L	R	E
Query Conservation																																																																													.
Alig confidence		.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation		.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	R	A	A	A	L	R	L	Q	R	M	D	.	.	.	.	.	.	.	I	P	A	Y	K	I	G	S	G	E	C	N	N	Y	P	L	I	K	L	V	A	S	F	.	.	.	.	.	.	.	.	.	.	.	G	K	P	I	I	L	S	T	G	M	N	S	I	E	S	I	K	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.											T	.	.	.	.	.	.	.		S						G	G	G	T	T										T	T	.	.	.	.	.	.	.	.	.	.	.		S							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												114	.	.	.	.	.	120	.	.	.	.								.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.												.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	R	D	I	I	E	R	G	Y	E	G	Y	C	T	V	E	L	V	T	M	Y	M	N	E	P	R	L	Y	A	R	Q	A	L	E	R	F	R	A	L	L	P	E
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		S	V	E	I	I	R	E	A	G	.	V	P	Y	A	L	L	H	C	T	N	I	Y	P	T	P	Y	E	D	V	R	L	G	G	M	N	D	L	S	E	A	F	P	D
Template Known Secondary structure										T	.												S	S								T	T										T	T
Template Predicted Secondary structure											.
Template SS confidence
		166	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions