Job Description P45541 Confidence 62.40% Date Thu Jan 5 12:03:00 GMT 2012 Rank 241 Aligned Residues 128 % Identity 13% Template c1vliA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution Resolution 2.38 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.															.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	H	A	F	R	D	A	S	E	L	G	Y	D	G	I	E	I	W	G	G	R	P	H	A	F	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	Q	M	P	I	I	G	Y	T	P	E	T	N	G	Y	P	Y	N	M	M	L	G	D
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.					.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.					.	.	.	.	.
Template Sequence		F	A	L	I	D	A	A	A	E	A	G	A	D	A	V	K	F	Q	X	F	Q	A	D	R	X	Y	Q	K	D	P	D	V	S	I	F	S	L	V	Q	S	X	E	X	P	A	E	W	I	L	P	L	L	D	Y	C	R	E	K	Q	V	I	F	L	S	.	.	.	.	.	.	.	T	V	C	D	.	.	.	.	.
Template Known Secondary structure												T		S							B		G	G	G	G	T	S											G	G	G	B	S	S		G	G	G											T	T						.	.	.	.	.	.	.	B			S	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.					.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	M	R	R	E	S	L	D	M	I	K	L	A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	M	D	L	I	L	E	P	L	T	P	Y	E	S	N	V	V	C	N	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	E	G	S	A	D	L	L	Q	S	T	S	P	S	A	F	K	I	A	S	Y	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	L	P	L	L	K	Y	V	A	R	L	N	R	P	X	I	F	S	T	A	.	.	.	.	G	A	E	I	S	D	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.									T	T			S						G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										T	T		S							T	.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template SS confidence
													112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	V	L	H	A	L	A	L	V	P	S	P	R	L	F	S	M	V	D	I	C	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	E	A	W	R	T	I	R	A	E	G	N	N	Q	I	A	I	X	H	C	V	A	K	Y
Template Known Secondary structure										T	T	T											S	S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions