Job Description P45541 Confidence 96.60% Date Thu Jan 5 12:03:00 GMT 2012 Rank 50 Aligned Residues 199 % Identity 17% Template c1sr9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of leua from mycobacterium tuberculosis Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																													.	.	.	.
Query SS confidence																																													.	.	.	.
Query Sequence		H	A	F	R	D	A	S	E	L	G	Y	D	G	I	E	I	W	G	G	R	P	H	A	F	A	P	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	.	.	.	.	Q	M	P	I	I	G	Y	T	P	E	T	N	G	Y	P	Y	N	M	M	L	G	D	E	H	M	R	R	E	S	L	D	M	I
Query Conservation																																													.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																				.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	X	F	D	L	L	V	R	X	G	Y	K	E	I	E	V	G	.	.	.	.	.	.	.	F	P	S	A	S	Q	T	D	F	D	F	V	R	E	I	I	E	Q	G	A	I	P	D	D	V	T	I	Q	V	L	T	Q	C	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	I
Template Known Secondary structure											T		S						.	.	.	.	.	.	.		T	T	T														T	T		S		T	T									S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.								.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																			.	150	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.																								.	.	.
Query SS confidence																										.	.	.	.	.	.																								.	.	.
Query Sequence		K	L	A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	.	.	.	.	.	.	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	.	.	.	N	I	G	M	D	L	I	L	E	P	L	T	P	Y	E	S	N	V	V	C	N	A	N	D
Query Conservation																										.	.	.	.	.	.																								.	.	.
Alig confidence																										.	.	.	.	.	.																								.	.	.																			.
Template Conservation																																																																												.
Template Sequence		E	R	T	F	Q	A	C	S	G	A	P	R	A	I	V	H	F	Y	N	S	T	S	I	L	Q	R	R	V	V	F	R	A	N	R	A	E	V	Q	A	I	A	T	D	G	A	R	K	C	V	E	Q	A	A	K	Y	P	G	T	Q	W	R	F	E	Y	S	P	E	S	Y	T	G	T	E	L	.	E	Y	A	K	Q
Template Known Secondary structure									T	T		S																		T	S																									S		S	S										T	G	G	G	S			.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230
		164	.	.	.	.	.	170	.	.	.	.	.							.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.																	.	.	.
Predicted Secondary structure														.	.	.	.	.	.												.															.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.												.															.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	H	A	L	A	L	V	P	S	P	R	.	.	.	.	.	.	L	F	S	M	V	D	I	C	A	P	Y	.	V	Q	A	E	P	V	M	S	Y	F	D	K	L	G	.	.	.	.	D	K	L	R	H	L	H	I	V	D	S	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	D
Query Conservation														.	.	.	.	.	.												.															.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.												.															.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	C	D	A	V	G	E	V	I	A	P	T	P	E	R	P	I	I	F	N	L	P	A	T	V	E	X	T	T	P	N	V	Y	A	D	S	I	E	W	X	S	R	N	L	A	N	R	E	S	V	I	L	S	L	H	P	H	N	D	R	G	T	A	V	A	A	A	E	L	G	F	A	A	G	A	D	R	I	E	G
Template Known Secondary structure													B	T	T	B									S	S			S																S	S	S	G	G	G								B		T	T	S												T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		217	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		T	H	Y	I	P	G	E	.	.	G	K	M	P	L	R	E	L	M	R	D	I	I	E	R	G	Y	E
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		C	L	F	G	N	G	E	R	T	G	N	V	C	L	V	T	L	G	L	N	L	F	S	R	G	V	D
Template Known Secondary structure		B	G	G	G		S	S	T	T		B		B										T	T	T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions