Job Description P45541 Confidence 96.45% Date Thu Jan 5 12:03:00 GMT 2012 Rank 52 Aligned Residues 225 % Identity 14% Template c1rr2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcarboxylase 5s subunit; PDBTitle: propionibacterium shermanii transcarboxylase 5s subunit bound to 2-2 ketobutyric acid Resolution 2.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		H	A	F	R	D	A	S	E	L	G	Y	D	G	I	E	I	W	G	G	R	P	H	A	F	A	P	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	.	.	Q	M	P	I	I	G	Y	T	P	E	T	N	G	Y	P	Y	N	M	M	L	G	D	E	H	M	R	R	E	S	L	D	M	I	K	L
Query Conservation																																													.	.
Alig confidence																																													.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.
Template Sequence		G	A	C	A	D	I	D	A	A	G	Y	W	S	V	E	C	W	G	G	A	T	Y	D	S	C	I	R	F	L	N	E	D	P	W	E	R	L	R	T	F	R	K	L	M	P	N	S	R	L	Q	M	L	L	R	G	Q	N	L	L	G	Y	R	H	Y	.	.	.	.	.	.	.	.	.	N	D	E	V	V	D	R
Template Known Secondary structure		G	G						T	S			S							T	T								T	S																T	T	S								G	G	G	T	T	S	S	S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.										.	.	.	.	.	.	110
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	Y	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	E	N	I	G	M	D	L	I	L	E	P	L	T	P	Y	E	S	N	V	.	V	C	N	A	N	D	V	L	H	A	L	A	L	V	P	S
Query Conservation																																																																	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	D	K	S	A	E	N	G	M	D	V	F	R	V	F	D	A	M	N	D	.	.	.	.	.	.	.	.	.	.	.	.	P	R	N	M	A	H	A	M	A	A	V	K	K	A	G	K	H	A	Q	G	T	I	C	Y	T	I	S	P	V	H	T	V	E	G	Y	V	K	L	A	G	Q	L	L	D	M	G	A
Template Known Secondary structure									T	T									T	T			.	.	.	.	.	.	.	.	.	.	.	.	T													T	T													T	T																T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.													.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.																			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure															.															.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.															.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	L	F	S	M	V	D	I	C	A	P	Y	.	V	Q	A	E	P	V	M	S	Y	F	D	K	L	G	.	.	D	K	L	R	H	L	H	I	V	D	S	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	D	T	H	Y	I	P	G	E	G	K	M	P	L	R	E	L	M
Query Conservation															.															.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.															.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	I	A	L	K	D	M	A	A	L	L	K	P	Q	P	A	Y	D	I	I	K	A	I	K	D	T	Y	G	Q	K	T	Q	I	N	L	H	C	H	S	T	T	G	V	T	E	V	S	L	M	K	A	I	E	A	G	V	D	V	V	D	T	A	I	S	S	M	S	L	G	P	G	H	N	P	T	E	S	V	A
Template Known Secondary structure		S							T	T																					T	T								B		T	T	S												T	T		S					B		G	G	G		S	T	T	S	B		B
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	I	I	E	R	G	Y	E	G	Y	C	T	V	E	L	V	T	M	Y	M	N	E	P	R	L	Y	A	R	Q	A	L	E	R	F	R	A	L	L	P	E
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	M	L	E	G	T	G	Y	T	T	N	L	D	Y	D	.	.	.	.	.	.	.	.	.	.	.	R	L	H	K	I	R	D	H	F	K	A	I	R	P	K
Template Known Secondary structure			T	T	T	T	T	T									.	.	.	.	.	.	.	.	.	.	.													G	G	G
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.												.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions