Job Description P45541 Confidence 53.20% Date Thu Jan 5 12:03:00 GMT 2012 Rank 301 Aligned Residues 128 % Identity 11% Template c1njjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:ornithine decarboxylase; PDBTitle: crystal structure determination of t. brucei ornithine2 decarboxylase bound to d-ornithine and to g418 Resolution 2.45 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	E	H	A	F	R	D	A	S	E	L	G	Y	D	G	I	E	I	W	G	G	R	P	H	A	F	A	P	D	L	K	A	G	G	I	K	Q	I	K	A	L	A	Q	T	Y	Q	M	P	I	I	G	Y	T	P	E	T	N	G	Y	P	Y	N	M	M	L	G	D	E	H	M	R	R	E	S	L	D	M	I	K
Query Conservation
Alig confidence																												.	.	.																																.	.	.	.	.
Template Conservation																												.	.	.																																.	.	.	.	.
Template Sequence		C	V	D	E	L	E	K	V	A	K	T	H	P	K	A	K	M	V	L	R	I	S	T	V	K	F	.	.	.	G	A	K	V	E	D	C	R	F	I	L	E	Q	A	K	K	L	N	I	D	V	T	G	V	S	F	H	V	G	S	G	.	.	.	.	.	S	T	D	A	S	T	F	A	Q	A	I	S	D	S	R
Template Known Secondary structure		S												T	T							B					S	.	.	.		B		G	G	G											T	T												S		.	.	.	.	.		S		T
Template Predicted Secondary structure																												.	.	.																																.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.						.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.																								.	.
Query SS confidence																								.																								.	.
Query Sequence		L	A	M	D	M	A	K	E	M	N	A	G	Y	T	L	I	S	A	A	H	A	G	.	Y	L	T	P	P	N	V	I	W	G	R	L	A	E	N	L	S	E	L	C	E	Y	A	.	.	E	N	I	G	M	D	L	I	L	E	P
Query Conservation																								.																								.	.
Alig confidence																								.																								.	.
Template Conservation
Template Sequence		F	V	F	D	M	G	T	E	L	G	F	N	M	H	I	L	D	I	G	G	G	F	P	G	T	R	D	A	P	L	K	F	E	E	I	A	G	V	I	N	N	A	L	E	K	H	F	P	P	D	L	K	L	T	I	V	A	E	P
Template Known Secondary structure										T	T														S	S	T	T	S	S	S																	S				T	T
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions