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Job DescriptionP45541
Confidence31.89%DateThu Jan 5 12:03:00 GMT 2012
Rank427Aligned Residues112
% Identity15%Templatec1cygA_
PDB info PDB header:glycosyltransferaseChain: A: PDB Molecule:cyclodextrin glucanotransferase; PDBTitle: cyclodextrin glucanotransferase (e.c.2.4.1.19) (cgtase)
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20 .........30....... ..40.........50.........60........
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Query Sequence  IEHAFR. . DASELGYDGIEIWGGRP. . . . . . . . . . . . . . . . . . . . . . . . HAFAPDLKAGGIKQIKALAQTYQMPIIGYTP
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Template Sequence  IINKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDFA
Template Known Secondary structure  TSTTTTTT









SSSS


STTS
S
TTT

TT

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   54.....60.........70.........80.........90.........100.........110.........120.........130...
 
   6970.........80. ........90....
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Query Sequence  ETNGYPYNMMLGD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EHMRRESLDMIKL
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Template Sequence  PNHTSPASETNPSYMENGRLYDNGTLLGGYTNDANMYFHHNGGTTFSSLEDGIYRNLFDLADLNHQNPVIDRYLKDAVKM
Template Known Secondary structure  TT

SS
TTSTTTT
TT
STT
TT

B

S
B


SSSSBSTTB
TTS
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   134.....140.........150.........160.........170.........180.........190.........200.........210...
 
   95....100.........110.........120.........130
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Query Sequence  AMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAEN
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Template Sequence  WI. . . . DMGIDGIRMDAVKHMPFGWQKSLMDEIDNY
Template Known Secondary structure  ....TTT

S
GGGS
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   214. ....220.........230.........240.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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