 |
Job Description | P25665 | Confidence | 22.87% | Date | Thu Jan 5 11:42:13 GMT 2012 |
Rank | 97 | Aligned Residues | 125 |
% Identity | 13% | Template | d1vjia_ |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 2.00 |
|
 |
  |   |
575 | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | |
|
|
. | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . |
|  |  |  |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | Q | I | A | L | A | L | R | D | E | V | A | D | L | E | A | A | G | I | G | I | I | Q | I | D | E | P | . |
. |
. |
A | L | R | E | G | L | . |
. |
. |
. |
. |
. |
. |
. |
P | L | R | R | S | D | W | D | A | Y | L | Q | W | G | V | E | A | F | R | I | N | A | A | V | A | K | D | D | T | Q | I | H | T | H | M | C |
Query Conservation |   |
  |
|
|
|   |
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|
|
|
|
|
| . | . | . |
|
|   |
|   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |   |
|   |
|
|
|   |
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|
|   |
|
|
|   |   |   |
|   |
|   | . |
|   |
|
|   |
|
Template Sequence |   |
P | G | I | V | N | D | F | R | L | A | A | R | N | A | M | E | A | G | F | D | G | V | E | I | H | G | A | N | G | Y | L | I | D | Q | F | M | K | D | T | V | N | D | R | T | D | E | Y | G | G | S | L | Q | N | R | C | K | F | P | L | E | I | V | D | A | V | A | K | E | I | G | P | D | R | . |
V | G | I | R | L | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |
| T | T | T |
|
|
|
| S | T | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | . |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | |
. | . | . | . | . | . |
  |
  |   |
644 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 |
Predicted Secondary structure |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | C | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | N | D | I | M | D | S | I | A | A | L | D | A | D | V | I | T | I | E | T | S | R | S | D | M | E | L | L | E | S | F | E | E | F | D | Y | P | N | E | I | G | P | G | V | Y | D | I | H | S | P | N | V | P | S | V | E | W | I | E | A | L | L | K | K |
Query Conservation |   |
  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |
| . | . |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|
|   |   |
|   |   |   | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
P | F | A | D | Y | M | E | S | G | D | T | N | P | G | A | L | G | L | Y | M | A | E | S | L | N | K | Y | G | I | L | Y | C | H | V | . |
. |
I | E | A | R | M | H | T | L | M | P | M | R | K | A | F | K | G | T | F | I | S | A | G | G | F | T | . |
. |
. |
. |
. |
. |
. |
. |
R | E | D | G | N | E | A | V | S | K |
Template Known Secondary structure |   |
T | T |
|
| T | T | T |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T |
| S |  |  |  |  | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
| S |  |  |  |  |  | S | S |
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | |
|
. | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 300 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|