Job Description P25665 Confidence 100.00% Date Thu Jan 5 11:42:13 GMT 2012 Rank 7 Aligned Residues 317 % Identity 27% Template c3rpdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:methionine synthase (b12-independent); PDBTitle: the structure of a b12-independent methionine synthase from shewanella2 sp. w3-18-1 in complex with selenomethionine. Resolution 1.50 Å

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		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	P	T	T	T	I	G	S	F	P	Q	T	T	E	I	R	T	L	R	L	D	F	K	K	G	N	L	D	A	N	N	Y	R	T	G	I	A	E	H	I	K	Q	A	I	V	E	Q	E	R	L	G	L	D	V	L	V	H	G	E	A	E	R	N	D	M	V	E	Y	F	G	E	H	L	D	G	F	V	F	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	P	T	S	T	A	G	S	L	P	K	P	L	W	L	A	E	P	E	T	L	W	S	P	W	K	L	Q	G	E	E	L	I	T	G	K	H	D	A	L	R	L	S	L	Q	D	Q	Q	L	A	G	I	D	I	V	S	D	G	E	Q	T	R	Q	H	F	V	T	T	F	I	E	H	L	N	G	V	D	F	S
Template Known Secondary structure			S					S	S						T	T	T	B		T	T		S	S			B	S																								T	T		S	S	B			T	T	T	T		S		T	T						T	S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	G	W	V	Q	S	Y	G	S	R	C	V	K	P	P	I	V	I	G	D	I	S	R	P	A	P	I	T	V	E	W	A	K	Y	A	Q	S	L	T	D	K	P	V	K	G	M	L	T	G	P	V	T	I	L	C	W	S	F	P	R	E	D	V	S	R	E	T	I	A	K	Q	I	A	L	A	L	R	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	K	I	V	K	I	R	D	R	Y	D	A	S	V	P	T	V	V	G	P	V	S	R	Q	K	S	V	F	V	E	D	A	K	F	L	R	K	Q	T	T	Q	P	I	K	W	A	L	P	G	P	X	T	X	I	D	T	L	Y	D	D	H	Y	K	S	R	E	K	L	A	W	E	F	A	K	I	L	N	E	E
Template Known Secondary structure									T	T	T																S		S	S												S	S		B												T	T	S			S	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.																			.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	D	L	E	A	A	G	I	G	I	I	Q	I	D	E	P	A	L	R	E	G	L	P	L	R	R	S	D	W	D	A	Y	L	Q	W	G	V	E	A	F	R	I	N	A	A	V	A	K	D	D	T	Q	I	H	T	H	M	C	Y	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.																													.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.																													.	.
Template Sequence		A	K	E	L	E	A	A	G	V	D	I	I	Q	F	D	E	P	A	F	.	.	.	.	.	.	.	N	V	F	F	D	E	V	N	D	W	G	I	A	C	L	E	R	A	I	E	G	L	K	C	E	T	A	V	.	.	H	I	C	Y	G	Y	G	I	K	A	N	T	D	W	K	K	T	L	G	S	E	W	R	Q
Template Known Secondary structure								T	T		S							G	G	G	.	.	.	.	.	.	.	G	T								T										T	T			S					.	.				S			S	S								T	T	S		S				G
Template Predicted Secondary structure																					.	.	.	.	.	.	.																													.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	D	I	M	D	S	I	A	A	L	D	A	D	V	I	T	I	E	T	S	R	S	D	M	E	L	L	E	S	F	E	E	F	D	Y	P	N	E	I	G	P	G	V	Y	D	I	H	S	P	N	V	P	S	V	E	W	I	E	A	L	L	K	K	A	A	K	R	I	P	A	E	R	L	W	V	N	P	D	C
Query Conservation
Alig confidence																											.	.
Template Conservation																											.	.
Template Sequence		Y	E	E	V	F	P	K	L	Q	K	S	N	I	D	I	I	S	L	E	C	H	N	S	H	V	.	.	P	X	E	L	L	E	L	I	R	G	K	K	V	X	V	G	A	I	D	V	A	T	D	T	I	E	T	A	E	E	V	A	D	T	L	R	K	A	L	K	F	V	D	A	D	K	L	Y	P	C	T	N	C
Template Known Secondary structure		G	G	G	T							S	S									T	T				.	.		G	G	G	G	G	G	G	T	T	S							S		T	T			S																T	T	S		G	G	G						S	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		727	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	K	T	R	G	W	P	E	T	R	A	A	L	A	N	M	V	Q	A	A	Q	N	L	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	X	T	P	L	S	H	Q	V	T	R	G	K	L	N	A	L	S	A	G	A	E	I	V	R	K
Template Known Secondary structure				T	T	S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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