Job Description P25665 Confidence 100.00% Date Thu Jan 5 11:42:13 GMT 2012 Rank 2 Aligned Residues 728 % Identity 46% Template c3l7sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:5-methyltetrahydropteroyltriglutamate--homocysteine PDBTitle: crystal structure of mete coordinated with zinc from streptococcus2 mutans Resolution 2.19 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	I	L	N	H	T	L	G	F	P	R	V	G	L	R	R	E	L	K	K	A	Q	E	S	Y	W	A	G	N	S	T	R	E	E	L	L	A	V	G	R	E	L	R	A	R	H	W	D	Q	Q	K	Q	A	G	I	D	L	L	P	V	G	D	F	A	W	Y	D	H	V	L	T	T	S	L	L	L	G	N	V
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		M	T	.	K	V	S	S	L	G	Y	P	R	L	G	E	N	R	E	W	K	K	L	I	E	A	Y	W	A	G	K	V	S	K	N	D	L	F	A	G	A	K	E	L	R	L	D	F	L	K	K	Q	L	N	A	G	L	D	L	I	P	V	G	D	F	S	L	Y	D	H	I	L	D	L	S	V	Q	F	N	I	I
Template Known Secondary structure				.			B		S				S	S		T	T	S											T	T		S																							T	T		S	B				S				S	S											T
Template Predicted Secondary structure				.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		P	A	R	H	Q	N	K	D	G	S	V	D	I	D	T	L	F	R	I	G	R	G	R	A	P	T	G	E	P	A	A	A	A	E	M	T	K	W	F	N	T	N	Y	H	Y	M	V	P	E	F	V	K	G	Q	Q	F	K	L	T	W	T	Q	L	L	D	E	V	D	E	A	L	A	.	L	G	H	K	V	K	P
Query Conservation																																																																										.
Alig confidence								.	.															.	.	.	.	.																								.																						.
Template Conservation								.	.															.	.	.	.	.																								.
Template Sequence		P	K	R	F	A	K	.	.	E	P	I	D	I	D	L	Y	F	A	I	A	R	G	.	.	.	.	.	N	E	N	V	A	S	S	M	K	K	W	F	N	T	N	Y	H	Y	I	V	P	E	W	.	S	K	Q	R	P	K	L	N	N	N	R	L	L	D	L	Y	L	E	A	R	E	V	V	G	D	K	A	K	P
Template Known Secondary structure			G	G	G	T	T	.	.	S		S	S											.	.	.	.	.												T	T	S	S							B		.		S	S																					G	G	G
Template Predicted Secondary structure								.	.															.	.	.	.	.																								.
Template SS confidence
		80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		V	L	L	G	P	V	T	W	L	W	L	G	K	V	K	G	E	Q	F	D	R	L	S	L	L	N	D	I	L	P	V	Y	Q	Q	V	L	A	E	L	A	K	R	G	I	E	W	V	Q	I	D	E	P	A	L	V	L	E	L	P	Q	A	W	L	D	A	Y	K	P	A	Y	D	A	L	.	.	.	Q	G	Q	V
Query Conservation																																																																											.	.	.
Alig confidence															.	.	.																																																										.	.	.
Template Conservation															.	.	.
Template Sequence		V	I	T	G	P	I	T	Y	V	A	L	S	T	.	.	.	G	V	E	D	F	T	A	A	V	K	S	L	L	P	L	Y	K	Q	V	F	T	E	L	V	K	A	G	A	S	Y	I	Q	V	D	E	P	I	F	V	T	D	E	G	K	D	Y	L	Q	A	A	K	A	V	Y	A	Y	F	A	K	E	V	P	D	A
Template Known Secondary structure												T		B	.	.	.	S		S																							T	T									G	G	G	G	S	S	G	G	G	G	G															S	T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.
Predicted Secondary structure																																											.																																					.
Query SS confidence																																											.																																					.
Query Sequence		K	L	L	L	T	T	Y	F	E	G	V	T	P	N	L	D	T	I	T	A	L	P	V	Q	G	L	H	V	D	L	V	H	G	K	D	D	V	A	E	L	H	.	K	R	L	P	S	D	W	L	L	S	A	G	L	I	N	G	R	N	V	W	R	A	D	L	T	E	K	Y	A	Q	I	K	D	I	V	G	.	K
Query Conservation																																											.																																					.
Alig confidence																.																											.																																					.
Template Conservation																.
Template Sequence		K	F	I	F	Q	T	Y	F	E	G	L	I	D	S	.	Q	V	L	S	Q	L	P	V	D	A	F	G	L	D	F	V	Y	G	L	E	E	N	L	E	A	I	K	T	G	A	F	K	G	K	E	I	F	A	G	V	I	D	G	R	N	I	W	S	S	D	F	V	K	T	S	A	L	L	E	T	I	E	E	Q	S
Template Known Secondary structure									S	S			T	T		.				T	T	S	S		S						S	S	S	S										T	T	T	T	T	T	S									T	T	S		B																	T	S
Template Predicted Secondary structure																.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	L	W	V	A	S	S	C	S	L	L	H	S	P	I	D	L	S	V	E	T	R	L	D	A	E	V	K	S	W	F	A	F	A	L	Q	K	C	H	E	L	A	L	L	R	D	A	L	N	S	G	D	T	A	A	L	A	E	W	S	A	P	I	Q	A	R	R	H	S	T	R	V	H	N	P	A	V	E	K
Query Conservation
Alig confidence																																																																								.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.
Template Sequence		A	A	L	T	I	Q	P	S	C	S	L	L	H	V	P	V	T	T	K	N	E	T	D	L	D	P	V	L	R	N	G	L	A	F	A	D	E	K	L	T	E	V	K	R	L	A	E	H	L	D	G	R	E	D	P	A	Y	D	L	H	I	A	H	F	D	A	L	Q	A	A	.	.	.	.	.	D	F	R	N	V
Template Known Secondary structure		S							S	S		G	G	G	S		S		S	T	T			S	S						T	T	B																		T	T																		T	S	.	.	.	.	.	G	G	G	S
Template Predicted Secondary structure																																																																								.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.						.	380	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	A	I	T	A	Q	D	S	Q	R	A	N	V	Y	E	V	R	A	E	A	Q	R	A	R	F	K	L	P	A	W	P	T	T	T	I	G	S	F	P	Q	T	T	E	I	R	T	L	R	L	D	F	K	K	G	N	L	D	A	N	N	Y	R	T	G	I	A	E	H	I	K	Q	A	I	V	E	Q	E	R
Query Conservation
Alig confidence																																													.	.	.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence		K	L	E	D	L	S	R	V	A	T	K	R	P	S	D	F	A	K	R	R	D	I	Q	Q	E	K	L	H	L	P	L	L	P	T	T	T	I	G	S	F	P	Q	S	.	.	.	.	.	I	R	R	T	R	A	W	G	D	I	S	D	A	E	Y	K	Q	F	I	Q	A	E	I	E	R	W	I	R	I	Q	E	D
Template Known Secondary structure						G	G	G	S		S	S		S	S																	S	S		B	B			S	B					.	.	.	.	.		T	T	T
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.						.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	D	V	L	V	H	G	E	A	E	R	N	D	M	V	E	Y	F	G	E	H	L	D	G	F	V	F	T	Q	N	G	W	V	Q	S	Y	G	S	R	C	V	K	P	P	I	V	I	G	D	I	S	R	P	A	P	I	T	V	E	W	A	K	Y	A	Q	S	L	T	D	K	P	V	K	G	M	L	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	L	D	V	L	V	H	G	E	F	E	R	V	D	M	V	E	F	F	G	Q	K	L	A	G	F	T	T	T	K	F	G	W	V	Q	S	Y	G	S	R	A	V	K	P	P	I	I	Y	G	D	V	Q	H	L	E	P	I	T	V	E	E	T	V	Y	A	Q	S	L	T	D	R	P	V	K	G	M	L	T	G
Template Known Secondary structure			T		S	B	B			B		T	T		S		T	T					T	S								S	S							T	T																S		S	S									T	T		S	S		B
Template Predicted Secondary structure
Template SS confidence
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	T	I	L	C	W	S	F	P	R	E	D	V	S	R	E	T	I	A	K	Q	I	A	L	A	L	R	D	E	V	A	D	L	E	A	A	G	I	G	I	I	Q	I	D	E	P	A	L	R	E	G	L	P	L	R	R	S	D	W	D	A	Y	L	Q	W	G	V	E	A	F	R	I	N	A	A	V	A	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	T	I	T	N	W	S	F	E	R	T	D	I	P	R	D	Q	L	F	N	Q	I	G	L	A	I	K	D	E	I	K	L	L	E	N	A	G	I	A	I	I	Q	V	D	E	A	A	L	R	E	G	L	P	L	R	K	S	K	Q	K	A	Y	L	D	D	A	V	H	A	F	H	I	A	T	S	S	V	K	D
Template Known Secondary structure									S	B			S	S	S																							T	T															S		S	S	G	G	G																	T	T	S		T
Template Predicted Secondary structure
Template SS confidence
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
		635	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	Q	I	H	T	H	M	C	Y	C	E	F	N	D	I	M	D	S	I	A	A	L	D	A	D	V	I	T	I	E	T	S	R	S	D	M	E	L	L	E	S	F	E	E	F	D	Y	P	N	E	I	G	P	G	V	Y	D	I	H	S	P	N	V	P	S	V	E	W	I	E	A	L	L	K	K	A	A	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	Q	I	H	T	H	M	C	Y	S	K	F	D	E	I	I	D	A	I	R	A	L	D	A	D	V	I	S	I	E	T	S	R	S	H	G	D	I	I	E	S	F	E	T	A	V	Y	P	L	G	I	G	L	G	V	Y	D	I	H	S	P	R	V	P	T	K	E	E	V	V	A	N	I	E	R	P	L	R	Q
Template Known Secondary structure		T	S									S			T	T	T								T		S							G	G	G	T	T	G	G	G						T	T			S							S		T	T	S															G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.
		715	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	A	E	R	L	W	V	N	P	D	C	G	L	K	T	R	G	W	P	E	T	R	A	A	L	A	N	M	V	Q	A	A	Q	N	L	R	R
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		L	S	P	T	Q	F	W	V	N	P	D	C	G	L	K	T	R	Q	E	P	E	T	I	A	A	L	.	K	L	V	A	A	T	K	E	V	R	Q
Template Known Secondary structure		S		G	G	G						S	S		S	T	T	S										.
Template Predicted Secondary structure																												.
Template SS confidence
		704	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.		730	.	.	.	.	.	.	.	.	.	740