Job Description P25665 Confidence 99.46% Date Thu Jan 5 11:42:13 GMT 2012 Rank 10 Aligned Residues 193 % Identity 14% Template c3cyvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 shigella flexineri: new insights into its catalytic3 mechanism Resolution 2.80 Å

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		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.																.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	P	V	K	G	M	L	T	G	P	V	T	I	L	C	W	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	R	E	D	V	S	R	E	T	I	A	K	Q	I	A	L	A	L	R	D	E	V	A	D	L	E	A	A	G	I	G	I	I	Q	I	D	E	P	A	L	R	E	G	L	P	L
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		E	V	P	L	I	G	F	S	G	S	P	W	T	L	A	T	Y	M	V	E	G	G	S	S	K	A	F	T	V	I	K	K	M	M	Y	A	D	P	Q	A	L	H	A	L	L	D	K	L	A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	.	.	.	.
Template Known Secondary structure		S	S																			S	S			S	S									T	T																										T	T		S							T	T	G	G	G	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.					.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		R	R	S	D	W	D	A	Y	L	Q	W	G	V	E	A	F	R	I	N	A	A	V	A	.	.	.	.	K	D	D	T	Q	I	H	T	H	M	C	Y	C	E	F	N	D	I	M	D	S	I	A	A	L	D	A	D	V	I	T	I	E	T	S	R	S	D	M	E	L	L	E	S	F	E	E	F	D	Y	P	N	E
Query Conservation																									.	.	.	.
Alig confidence		.	.																						.	.	.	.												.																										.	.	.	.
Template Conservation		.	.																																					.																										.	.	.	.
Template Sequence		.	.	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	.	K	G	G	G	Q	W	L	E	A	M	A	E	T	G	C	D	A	L	G	L	D	W	T	T	D	.	.	.	.	I	A	D	A	R	R	R	V	G	N	K	V
Template Known Secondary structure		.	.	S									T											S		S			T	T										.	T	T	T	T	T	T						T	T	S		S						T	T	S		.	.	.	.									T	T	T	S
Template Predicted Secondary structure		.	.																																					.																										.	.	.	.
Template SS confidence
				214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.					.	.	.	.	.	280	.	.	.	.	.	.
		686	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.		.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		I	G	P	G	V	Y	D	I	H	S	P	N	V	P	S	V	E	W	I	E	A	L	L	K	K	A	A	K	R	I	.	P	A	E	R	L	W	V	N	P	D	C	G	L	K	T	R	G	W	P	E	T	R	A	A	L	A	N	M	V	Q	A	A	Q	N	L	R	R
Query Conservation																																.
Alig confidence													.																			.																			.	.	.
Template Conservation													.																																						.	.	.
Template Sequence		A	L	Q	G	N	M	D	P	S	M	L	.	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	H	Q	D	V	P	.	.	.	P	E	H	A	G	V	F	V	E	A	V	H	R	L	S	E
Template Known Secondary structure							B		G	G	G	G	.	G	S														T	T	T	T	T	S	S				B		B	S	S				T	T	S		.	.	.																G
Template Predicted Secondary structure													.																																						.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.				.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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