 |
Job Description | P25665 | Confidence | 34.27% | Date | Thu Jan 5 11:42:13 GMT 2012 |
Rank | 76 | Aligned Residues | 64 |
% Identity | 16% | Template | c2b7pA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:probable nicotinate-nucleotide pyrophosphorylase; |
PDBTitle: crystal structure of quinolinic acid phosphoribosyltransferase from2 helicobacter pylori
|
Resolution | 2.51 Å |
|
 |
  |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | L | A | E | L | A | K | R | G | I | E | W | V | Q | I | D | E | P | A | L | V | L | E | L | P | Q | A | W | L | D | A | Y | K | P | A | Y | D | A | L | Q | G | Q | V | K | L | L | L | T | T | Y | F | E | G | V | T | P | N | L | D | T | I | T | A | L | P | V | Q | G | L | H | V |
Query Conservation |   |
  |
|
|   |   |
|   |   |
|
|   |   |   |
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
| . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|
|
|
| . |   |   | . |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|
Template Sequence |   |
E | E | A | K | N | A | M | N | A | G | A | D | I | V | M | C | D | . |
. |
. |
. |
. |
. |
N | L | S | V | L | E | T | K | E | I | A | A | Y | R | D | A | H | Y | P | F | V | L | L | E | A | S | G | N | I | . |
S | L | . |
E | S | I | N | A | Y | A | K | S | G | V | D | A | I | S | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  | . | . | . | . | . | . | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T | S |  |  |  |  |  | S | S |
| . |
| T | . | T | T |  |  |  |  |  | T | T | T |
| S |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
| . |
|  | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | |
. | 240 | |
. | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|