Job Description P25665 Confidence 100.00% Date Thu Jan 5 11:42:13 GMT 2012 Rank 8 Aligned Residues 310 % Identity 19% Template c1ypxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative vitamin-b12 independent methionine synthase family PDBTitle: crystal structure of the putative vitamin-b12 independent methionine2 synthase from listeria monocytogenes, northeast structural genomics3 target lmr13 Resolution 2.60 Å

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		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	P	A	W	P	T	T	T	I	G	S	F	P	Q	T	T	E	I	R	T	L	R	L	D	F	K	K	G	N	L	D	A	N	N	Y	R	T	G	I	A	E	H	I	K	Q	A	I	V	E	Q	E	R	L	G	L	D	V	L	V	H	G	E	A	E	R	N	D	M	V	E	Y	F	G	E	H	L	D	G	F
Query Conservation
Alig confidence																																																																								.	.
Template Conservation																																																																								.	.
Template Sequence		Q	V	A	P	F	Y	A	D	H	V	G	S	I	L	R	T	K	G	I	K	D	A	R	E	K	F	Q	S	G	E	I	T	A	L	E	L	R	K	I	E	N	T	E	I	K	Y	I	V	E	K	Q	K	E	V	G	L	K	S	I	T	D	G	E	F	R	R	W	H	F	D	.	.	F	L	E	N	L	D	G	V
Template Known Secondary structure			S	S	S		S	B				S																		T	S	S																								T		S					T	T	T	T						.	.			T	T	S
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.			.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.				.	.	.	.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure																																													.	.																			.	.	.
Query SS confidence																																													.	.																			.	.	.
Query Sequence		V	F	T	Q	N	G	W	V	Q	S	Y	G	S	R	C	V	K	P	P	I	V	I	G	D	I	S	R	P	A	P	I	T	V	E	W	A	K	Y	A	Q	S	L	T	.	.	D	K	P	V	K	G	M	L	T	G	P	V	T	I	L	C	W	S	.	.	.	F	P	R	E	D	V	S	R	E	T	I	A	K	Q
Query Conservation																																													.	.																			.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.																			.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	I	T	G	P	I	D	F	T	T	H	P	F	I	E	D	F	I	F	L	K	E	A	V	G	D	N	H	V	A	K	Q	T	I	P	S	P	A	X	L	H	Y	R	G	D	I	E	Y	Q	P	Y	L	D	D	A	E	K	F	A	N	D
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.										S			T														S	S	S									T											S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.															.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		I	A	L	A	L	R	D	E	V	A	D	L	E	A	A	G	I	G	I	I	Q	I	D	E	P	A	L	R	E	G	L	P	L	R	R	S	D	W	D	A	Y	L	Q	W	G	V	E	A	F	R	I	N	A	A	V	A	K	D	D	T	Q	I	H	T	H	M	C	Y	C	E	F	N	D	I	M	D	S	I	A	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		L	A	T	A	Y	Q	K	A	I	Q	A	F	Y	D	A	G	C	R	Y	L	Q	L	D	D	T	S	W	S	Y	L	C	S	D	E	G	F	D	P	E	T	L	Q	E	T	Y	K	N	L	I	N	E	A	I	K	H	K	P	A	D	X	V	I	T	X	H	I	C	R	G	G	Y	G	P	V	A	E	T	L	F	G
Template Known Secondary structure																T	T														T	T	S					S	T	T	T													T	T	T			T	T													S	G	G	G					T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	D	A	D	V	I	T	I	E	T	S	R	S	D	M	E	L	L	E	S	F	E	E	F	D	Y	P	N	E	I	G	P	G	V	Y	D	I	H	S	P	N	V	P	S	V	E	W	I	E	A	L	L	K	K	A	A	K	R	I	P	A	E	R	L	W	V	N	P	D	C	G	L	K	T	R	G	W	P	E
Query Conservation
Alig confidence																									.	.																	.																																	.	.
Template Conservation																									.	.																	.																																	.	.
Template Sequence		K	L	N	I	D	G	F	F	L	E	Y	D	N	E	R	F	A	P	L	K	Y	V	T	.	.	R	P	D	L	K	I	V	L	G	L	I	T	S	K	T	G	.	E	E	D	E	A	A	I	K	A	R	I	E	E	A	S	E	I	V	P	L	S	Q	L	R	L	S	P	Q	C	G	F	A	.	.	T	E	E	E
Template Known Secondary structure		T				S								S					T	T					.	.		T	T										S	S	S		.				S														S		G	G	G						S	S				.	.
Template Predicted Secondary structure																									.	.																	.																																	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.
		736	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	A	A	L	A	N	M	V	Q	A	A	Q	N	L	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	W	D	K	L	R	Y	V	V	R	L	A	N	D	I	W	G
Template Known Secondary structure																	S
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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