Job Description P77359 Confidence 18.60% Date Thu Jan 5 12:28:09 GMT 2012 Rank 75 Aligned Residues 119 % Identity 18% Template c3o3nA_ PDB info PDB header:lyase Chain: A: PDB Molecule:alpha-subunit 2-hydroxyisocaproyl-coa dehydratase; PDBTitle: (r)-2-hydroxyisocaproyl-coa dehydratase in complex with its substrate2 (r)-2-hydroxyisocaproyl-coa Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	W	L	I	P	D	D	A	K	L	H	R	K	L	L	R	W	Y	S	S	V	Q	T	G	M	A	E	L	I	P	V	A	Q	Q	W	Q	T	E	E	P	E	S	E	D	A	R	Y	Y	L	C	A	Q	R	L	Y	C	G	E	G	E	S	L	L	A	D	L	C	A	Y	W	E	S	Y	P	S	T	Q	A	D
Query Conservation
Alig confidence														.														.	.	.	.								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.														.	.	.	.								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	P	C	W	P	Y	I	G	Y	K	M	.	K	T	L	A	K	F	G	V	N	M	T	G	S	.	.	.	.	V	Y	P	H	A	W	A	.	.	L	Q	Y	E	V	N	D	L	D	G	M	A	V	A	Y	S	T	M	F	N	N	V	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	M	T
Template Known Secondary structure		S				G	G	G						.						T	T							.	.	.	.	S					T	T	.	.					T	T											T	S	G	G	G	B			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.														.	.	.	.								.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.														320	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.							.	.	.	310	.	.	.	.	.	.	.	.					.	320	.	.	.	.	.	.	.	.	.											330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.													.	.	.	.												.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.													.	.	.	.												.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	L	L	Q	W	S	K	R	H	C	P	D	Y	F	A	L	L	V	.	.	.	.	.	.	M	V	I	E	A	R	S	M	V	D	A	Q	.	.	.	.	G	Q	P	L	K	Y	V	P	G	E	S	.	.	.	.	.	.	.	.	.	.	A	R	T	R	L	L	W	A	E	I	L	H	S	G	K	L	S	P
Query Conservation																					.	.	.	.	.	.													.	.	.	.												.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.													.	.	.	.												.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	R	V	D	S	L	V	E	G	K	C	D	G	A	F	Y	H	M	N	R	S	C	K	L	M	S	L	I	Q	Y	E	M	Q	R	R	A	A	E	E	T	G	L	P	Y	A	G	F	D	G	D	Q	A	D	P	R	A	F	T	N	A	Q	F	E	T	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T		S								S	S						T	T																							S	S		T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		348	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	Q	S	F	I	E	S	L	F	F	K	R	K
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	Q	G	L	V	E	V	M	E	E	R	K	K
Template Known Secondary structure		.	.
Template Predicted Secondary structure		.	.
Template SS confidence
				391	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions