Return to main results Retrieve Phyre Job Id

Job DescriptionP33924
Confidence94.84%DateThu Jan 5 11:52:48 GMT 2012
Rank29Aligned Residues136
% Identity11%Templated2pora_
SCOP infoTransmembrane beta-barrels Porins Porin
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   720.........730.........740.........750.........760.........770.........780. .
Predicted Secondary structure 














.................
Query SS confidence 





























































. . . . . . . . . . . . . . . . .
Query Sequence  HVESGFRWVDGLWSVRPYLAFTGFTTDGQDYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQ. . . . . . . . . . . . . . . . . N
Query Conservation    
 

        
 
 
 
 
         
  
  
      
    

 
        ................. 
Alig confidence 












....












































.................
Template Conservation               ....     
                   
  
          
                       
Template Sequence  EMAVAAAYTFGNY. . . . TVGLGYEKIDSPDTALMADMEQLELAAIAKFGATNVKAYYADGELDRDFARAVFDLTPVAAAA
Template Known Secondary structure  TT....
S
TTTS

TTTT



SS

Template Predicted Secondary structure 



....






























Template SS confidence 















































































   149150.........160. ........170.........180.........190.........200.........210.........220....
 
   783......790.........800.........810.........820.........830.........840.........850.........860..
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  GTTLEPWLKAAVRQEYADSNQVKVNDDGKFNNDVAGTSGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWT
Query Conservation 
    
       
 
                           
          
        
           
    
Alig confidence 















..















































..











Template Conservation           
 
 
  ..
                       

  
 


 
 
           ..       

   
Template Sequence  TAVDHKAYGLSVDSTF. . GATTVGGYVQVLDIDTIDDVTYYGLGASYDLGGGASIVGGIADNDLPN. . SDMVADLGVKFK
Template Known Secondary structure 
..TTTTTTT
SSS..


Template Predicted Secondary structure 




..















..

Template SS confidence 















































































   225....230.........240 .........250.........260.........270.........280........ .290.........300
 
   863
Predicted Secondary structure 
Query SS confidence 
Query Sequence  F
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  F
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   301
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions