Job Description P33924 Confidence 84.15% Date Thu Jan 5 11:52:48 GMT 2012 Rank 36 Aligned Residues 197 % Identity 12% Template d1phoa_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 3.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		631	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	D	S	R	F	S	R	E	E	S	S	T	I	R	G	L	I	F	G	Y	S	H	S	D	I	G	F	D	R	G	G	K	G	N	I	D	S	Y	T	L	G	A	Y	A	G	W	E	H	Q	N	G	A	Y	V	D	G	V	V	K	V	D	R	F	A	N	T	I	H	G	K	M	S	N	G	A	T	A	F	G
Query Conservation
Alig confidence																																																																					.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.
Template Sequence		G	L	A	T	Y	R	N	T	D	F	F	G	V	I	D	G	L	N	L	T	L	Q	Y	Q	G	K	N	E	N	R	D	V	K	K	Q	N	G	D	G	F	G	T	S	L	T	Y	D	F	G	G	S	D	F	A	I	S	G	A	Y	T	N	S	D	R	T	N	E	.	.	.	.	.	Q	N	L	Q	S	R	G	T
Template Known Secondary structure										S	T	T	T	T		T	T											B		S	S		S	T	T		B		S											T	T	T	T														G	G	.	.	.	.	.	G	T	T	S	S	S	S
Template Predicted Secondary structure																																																																					.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.
		711	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	N	S	N	G	A	G	A	H	V	E	S	G	F	R	W	V	D	G	L	W	S	V	R	P	Y	L	A	F	T	G	F	T	T	D	G	Q	D	Y	T	L	S	N	G	M	R	A	D	V	G	N	T	R	I	L	R	A	E	A	G	T	A	V	S	Y	H	M	D	L	Q	N	G	T	T	L	E	P	W	L
Query Conservation
Alig confidence														.	.	.	.							.	.	.	.																						.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation														.	.	.	.							.	.	.	.																						.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		G	K	R	A	E	A	W	A	T	G	L	K	.	.	.	.	Y	D	A	N	N	I	.	.	.	.	Y	L	A	T	F	Y	S	E	T	R	K	M	T	P	I	T	G	G	F	A	N	.	.	.	.	.	.	.	.	.	.	K	T	Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	.	.	G	L	R	P	S	L
Template Known Secondary structure		S	S											.	.	.	.				T	T		.	.	.	.											S		S			S	S	S	S		S	.	.	.	.	.	.	.	.	.	.														S	S	.	.	S
Template Predicted Secondary structure														.	.	.	.							.	.	.	.																						.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.											.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.
		791	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.						.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		K	A	A	V	R	Q	E	Y	A	D	S	N	Q	V	K	V	N	D	D	G	K	F	N	N	D	V	A	G	T	S	G	V	Y	Q	A	G	I	R	S	S	F	T	P	T	L	S	G	H	L	S	V	S	Y	G	N	G	A	G	.	.	.	.	.	V	E	S	P	W	N	T	Q	A	G	V	V	W	T	F
Query Conservation																																																												.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	V	L	S	K	.	.	.	.	.	.	.	.	.	.	.	G	K	D	I	E	G	I	G	D	E	D	L	V	N	Y	I	D	V	G	A	T	Y	Y	F	N	K	N	M	S	A	F	V	D	Y	K	I	N	Q	L	D	S	D	N	K	L	N	I	N	N	D	D	I	V	A	V	G	M	T	Y	Q	F
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.			S	B	T	T	T	B																S	S	S	S														S	S		T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.												280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions