Job Description P33924 Confidence 97.53% Date Thu Jan 5 11:52:48 GMT 2012 Rank 22 Aligned Residues 194 % Identity 13% Template d1i78a_ SCOP info Transmembrane beta-barrels OMPT-like Outer membrane protease OMPT Resolution 2.60

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		667	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.			.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.											.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730		.	.	.
Predicted Secondary structure																					.	.																						.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence																					.	.																						.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		D	S	Y	T	L	G	A	Y	A	G	W	E	H	Q	N	G	A	Y	V	.	.	D	G	V	V	K	V	D	R	F	A	N	T	I	H	G	K	M	S	N	G	A	.	.	.	.	.	.	.	.	.	.	T	A	F	G	D	Y	N	S	N	G	A	G	A	H	V	E	S	G	F	R	W	V	D	G	.	L	W	S
Query Conservation																					.	.																						.	.	.	.	.	.	.	.	.	.																									.
Alig confidence																					.	.																						.	.	.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		N	A	A	I	I	K	G	A	I	N	W	D	L	M	P	Q	I	S	I	G	A	A	G	W	T	T	L	G	S	R	G	G	N	M	V	D	Q	D	W	M	D	S	S	N	P	G	T	W	T	D	E	A	R	H	P	D	T	Q	L	N	Y	A	N	E	F	D	L	N	I	K	G	W	L	L	N	E	P	N	Y	R
Template Known Secondary structure															S	S	S											S	S														T	T	S	T	T	S		S																												S	S
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		734	.	.	.	.	.	740	.	.	.	.	.	.	.	.							.	750	.	.												.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	R	P	Y	L	A	F	T	G	F	T	T	D	G	Q	.	.	.	.	.	.	D	Y	T	L	.	.	.	.	.	.	.	.	.	.	.	S	N	G	M	R	A	D	V	G	N	T	R	I	L	R	A	E	A	G	T	A	V	S	Y	H	M	D	L	Q	N	G	T	T	L	E	P	W	L	K	A	A	V	R	Q
Query Conservation																	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		L	G	L	M	A	G	Y	Q	E	S	R	Y	S	F	T	A	R	G	G	S	Y	I	Y	S	S	E	E	G	F	R	D	D	I	G	S	F	P	N	G	E	R	A	I	G	Y	K	Q	R	F	K	M	P	Y	I	G	L	T	G	S	Y	R	Y	E	D	.	.	.	F	E	L	G	G	T	F	K	Y	S	G	W	V
Template Known Secondary structure																								B			T	T		S	S		B			B			T	T		S																						T	T	.	.	.
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.
		797	.	.	800	.	.	.	.	.	.	.	.		.	810	.	.	.	.	.	.	.	.	.	820	.	.		.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850
Predicted Secondary structure														.															.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.															.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Y	A	D	S	N	Q	V	K	V	N	D	.	D	G	K	F	N	N	D	V	A	G	T	S	G	V	.	Y	Q	A	G	I	R	S	S	F	T	P	T	L	S	G	H	L	S	V	S	Y	G	N	G	A	G	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.															.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.															.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	S	D	N	D	E	H	Y	D	P	K	G	R	I	T	Y	R	S	K	V	K	D	Q	N	Y	Y	S	V	A	V	N	A	G	Y	Y	V	T	P	N	A	K	V	Y	V	E	G	A	W	N	R	V	T	N	K	K	G	N	T	S	L	Y	D	H	N	N	N	T	S	D	Y	S	K	N	G	A	G	I	E	N
Template Known Secondary structure												S	S	S																										T	T																								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		851	.	.	.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	W	N	T	Q	A	G	V	V	W	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	N	F	I	T	T	A	G	L	K	Y	T	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions