Return to main results Retrieve Phyre Job Id

Job DescriptionP33924
Confidence100.00%DateThu Jan 5 11:52:48 GMT 2012
Rank1Aligned Residues293
% Identity15%Templatec3sljA_
PDB info PDB header:protein transportChain: A: PDB Molecule:serine protease espp; PDBTitle: pre-cleavage structure of the autotransporter espp - n1023a mutant
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   563......570.........580.........590.........600.........610.........620.........630.........640..
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  PSTTDVLNMAAAQPLVFDAELDTVRERLGSVKGVSYDTAMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESS
Query Conservation                                          
    
                  
   
 
         
Alig confidence 




















































....






















Template Conservation                         
  


  
      


    
       ....

     
   
 
         
Template Sequence  EATRNAAALFSVDYKAFLNEVANLNKRMGDLRDINGEAGAWARIMSGTGSASG. . . . GFSDNYTHVQVGVDKKHELDGLD
Template Known Secondary structure  TT





TT


STT....TTT
Template Predicted Secondary structure 















....








Template SS confidence 















































































   1002.......1010.........1020.........1030.........1040.........1050.... .....1060.........1070.......
 
   643......650.........660.........670.........680.........690.........700.........710.........720..
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  TIRGLIFGYSHSDIGFDRGGKGNIDSYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVE
Query Conservation     
                         
 
       
 
                                     
Alig confidence 


















.





































..



















Template Conservation     
               .         
 
                          ..                    
Template Sequence  LFTGFTVTHTDSSASADVF. SGKTKSVGAGLYASAMFDSGAYIDLIGKYVHHDNEYTA. . TFAGLGTRDYSTHSWYAGAE
Template Known Secondary structure 
SS.TTS..SSTT
Template Predicted Secondary structure 


.



..



Template SS confidence 















































































   1078.1080.........1090...... ...1100.........1110.........1120.........1130.... .....1140.........1150....
 
   723......730 .........740.........750..... ....760.........770.........780.........790........
Predicted Secondary structure 

.






...










Query SS confidence 







.
























. . .










































Query Sequence  SGFRWVDG. LWSVRPYLAFTGFTTDGQDYTLSNG. . . MRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEY
Query Conservation   

     .   
 
 
 
 
         
  
...  
      
    

 
         
    
       
 
Alig confidence 







.
























...


























.














Template Conservation   

         
 
   
 
         
      
        
     
           .               
Template Sequence  AGYRYHVTEDAWIEPQAELVYGSVSGKQFAWKDQGMHLSMKDKDYNPLIGRTGVDVGKSFSGKD. WKVTARAGLGYQFDL
Template Known Secondary structure 
SSSS
B


TT

B

TT.S
Template Predicted Secondary structure 




















.
Template SS confidence 















































































   1155....1160.........1170.........1180.........1190.........1200.........1210........ .1220.........1230...
 
   799800.........810. ........820.........830.........840.........850.........860...
Predicted Secondary structure 








..















Query SS confidence 












. .



















































Query Sequence  ADSNQVKVNDDGK. . FNNDVAGTSGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF
Query Conservation               ..              
          
        
           
    
Alig confidence 












..



















































Template Conservation                              

    
     
        
           
 

 
Template Sequence  LANGETVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
Template Known Secondary structure 



TT



TTTSSS
Template Predicted Secondary structure 
























Template SS confidence 


































































   1234.....1240.........1250.........1260.........1270.........1280.........1290.........1300
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions