Job Description P33924 Confidence 65.75% Date Thu Jan 5 11:52:48 GMT 2012 Rank 42 Aligned Residues 136 % Identity 14% Template c3jtyB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:benf-like porin; PDBTitle: crystal structure of a benf-like porin from pseudomonas fluorescens2 pf-5 Resolution 2.58 Å

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		718	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	H	V	E	S	G	F	R	W	V	D	G	L	W	S	V	R	P	Y	L	A	F	T	G	F	T	T	D	G	Q	D	Y	T	L	S	N	G	M	R	A	D	V	G	N	T	R	I	L	R	A	E	A	G	T	A	V	S	Y	H	M	D	L	Q	N	G	T	T	L	E	P	W	L	K	A	A	V	R	Q	E
Query Conservation
Alig confidence																																																																									.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		Q	Q	F	I	N	L	I	H	S	Q	P	L	G	D	W	T	L	G	A	N	L	G	F	F	Y	G	K	E	D	G	S	A	R	A	G	D	M	E	N	R	T	W	S	G	L	F	S	A	K	Y	G	G	N	T	F	Y	V	G	L	Q	K	L	T	G	D	S	A	W	M	R	V	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														S	S																T	T		T	T																	T	T													S	S					B	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		798	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.					.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.						.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure																																					.	.	.	.																	.	.	.	.	.
Query SS confidence																																					.	.	.	.																	.	.	.	.	.
Query Sequence		Y	A	D	S	N	Q	V	K	V	N	D	D	G	K	F	N	N	D	V	A	G	T	S	G	V	Y	Q	A	G	I	R	S	S	F	T	.	.	.	.	P	T	L	S	G	H	L	S	V	S	Y	G	N	G	A	G	.	.	.	.	.	V	E	S	P	W	N	T	Q	A	G	V	V	W	T	F
Query Conservation																																					.	.	.	.																	.	.	.	.	.
Alig confidence		.																																			.	.	.	.																	.	.	.	.	.
Template Conservation		.
Template Sequence		.	N	G	T	S	G	G	T	L	A	N	D	S	Y	N	A	S	Y	D	N	A	K	E	K	S	W	Q	V	R	H	D	Y	N	F	A	A	L	G	V	P	G	L	T	L	M	N	R	Y	I	S	G	S	N	V	H	T	A	T	V	S	D	G	K	E	W	G	R	E	S	E	V	A	Y	T	V
Template Known Secondary structure		.	T	T				T	T	S	T	T			S	S					S	T	T												T	T	T	T	T		T	T																T	T
Template Predicted Secondary structure		.
Template SS confidence
			307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions