Job Description P33924 Confidence 12.78% Date Thu Jan 5 11:52:48 GMT 2012 Rank 58 Aligned Residues 174 % Identity 10% Template c3fhhA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane heme receptor shua; PDBTitle: crystal structure of the heme/hemoglobin outer membrane2 transporter shua from shigella dysenteriae Resolution 2.60 Å

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		665	.	.	.	.	670	.	.	.	.	.	.	.	.	.					680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.		.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																												.
Query SS confidence																	.	.	.	.																												.
Query Sequence		N	I	D	S	Y	T	L	G	A	Y	A	G	W	E	H	.	.	.	.	Q	N	G	A	Y	V	D	G	V	V	K	V	D	R	F	A	N	T	I	H	G	K	M	S	N	G	A	.	T	A	F	G	D	Y	N	S	N	G	A	G	A	H	V	E	S	G	F	R	W	V	D	G	L	W	S	V	R	P	Y	L	A
Query Conservation																	.	.	.	.																												.
Alig confidence																	.	.	.	.																												.
Template Conservation
Template Sequence		T	N	E	T	Q	E	Y	G	F	G	L	R	F	D	D	L	M	L	S	N	D	A	L	E	F	K	A	S	Y	F	D	T	K	A	K	D	Y	I	S	T	T	V	D	F	A	A	A	T	T	M	S	Y	N	V	P	N	A	K	I	W	G	W	D	V	M	T	K	Y	T	T	D	L	F	S	L	D	V	A	Y	N
Template Known Secondary structure																S		T	T																										G	G	G	T																								S	S
Template Predicted Secondary structure
Template SS confidence
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
		740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	G	F	T	T	D	G	Q	D	Y	T	L	S	N	G	M	R	A	D	V	G	N	T	R	I	L	R	A	E	A	G	T	A	V	S	Y	H	M	D	L	Q	N	G	T	T	L	E	P	W	L	K	A	A	V	R	Q	E	Y	A	D	S	N	Q	V	K	V	N	D	D	G	K	F	N	N	D	V	A	G	T
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.																									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.																									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	R	G	K	D	T	D	T	.	.	.	.	.	.	.	.	.	.	G	E	Y	I	S	S	I	N	P	D	T	V	T	S	T	L	N	I	P	I	A	H	S	G	.	.	.	F	S	V	G	W	V	G	T	F	A	D	R	S	T	H	I	S	S	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	P	G
Template Known Secondary structure								T	T	T	.	.	.	.	.	.	.	.	.	.			B		S	S															T	T	S	S	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		529	530	.	.	.	.	.	.	.											.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.				.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.													.	.
		820	.	.	.	.	.	.	.	.	.	830	.	.				.	.	.	.	.	.	.	840	.	.								.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure															.	.	.											.	.	.	.	.	.	.
Query SS confidence															.	.	.											.	.	.	.	.	.	.
Query Sequence		S	G	V	Y	Q	A	G	I	R	S	S	F	T	.	.	.	P	T	L	S	G	H	L	S	V	S	.	.	.	.	.	.	.	Y	G	N	G	A	G	V	E	S	P	W	N	T	Q	A	G	V	V	W	T	F
Query Conservation															.	.	.											.	.	.	.	.	.	.
Alig confidence															.	.	.											.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	G	V	N	D	F	Y	V	S	Y	Q	G	Q	Q	A	L	K	G	M	T	T	T	L	V	L	G	N	A	F	D	K	E	Y	W	S	P	Q	G	I	P	Q	D	G	R	N	G	K	I	F	V	S	Y	Q	W
Template Known Secondary structure															G	G	G	T	T									S	T	T					B		T	T	S		B				S
Template Predicted Secondary structure
Template SS confidence
		587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions