Return to main results Retrieve Phyre Job Id

Job DescriptionP33924
Confidence15.68%DateThu Jan 5 11:52:48 GMT 2012
Rank57Aligned Residues192
% Identity16%Templatec3cslB_
PDB info PDB header:membrane protein/heme binding proteinChain: B: PDB Molecule:hasr protein; PDBTitle: structure of the serratia marcescens hemophore receptor hasr in2 complex with its hemophore hasa and heme
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   665....670.........680.........690.........700.. .......710.........720.........730
Predicted Secondary structure 






..............





Query SS confidence 





































. . . . . . . . . . . . . .



























Query Sequence  NIDSYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKM. . . . . . . . . . . . . . SNGATAFGDYNSNGAGAHVESGFRWVDG
Query Conservation         
 
       
 
                  ..............                   
 

     
Alig confidence 





































..............



























Template Conservation       
 
                           
 
                                          
Template Sequence  RSRAWEVGFNVQQPDLWFEGDRLVAKVAYFDTKVDNYINLAIDRNKPGLVQPSIGNAAYVNNLSKTRFRGLEYQLNYDAG
Template Known Secondary structure  SSSSTT
S


S


SBS



TT

SS
S
Template Predicted Secondary structure 







































Template SS confidence 















































































   618.620.........630.........640.........650.........660.........670.........680.........690.......
 
   731........740.........750.........760.. .......770.........780
Predicted Secondary structure 








..............................


Query SS confidence 































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

















Query Sequence  LWSVRPYLAFTGFTTDGQDYTLSNGMRADVGN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TRILRAEAGTAVSYHMDL
Query Conservation     
 
 
 
 
         
  
  
    ..............................  
    

 
       
Alig confidence 































..............................

















Template Conservation                                                                   
              
Template Sequence  VFYADLTYTHMIGKNEFCSNKAWLGGRLRYGDGSRRGNFYVEPDAASNDFVTCDGGTQFGSAAYLPGDRGSVTLGGRAFD
Template Known Secondary structure  S





SSTT

B
S

SSS



S


TT


SGGGS





TT
Template Predicted Secondary structure 



















































Template SS confidence 















































































   698.700.........710.........720.........730.........740.........750.........760.........770.......
 
   781........790.........800.........810.........820.........830.........840.........850....
Predicted Secondary structure 





























......
Query SS confidence 









































































. . . . . .
Query Sequence  QNGTTLEPWLKAAVRQEYADSNQVKVNDDGKFNNDVAGTSGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPWN. . . . . .
Query Conservation    
    
       
 
                           
          
        
        ......
Alig confidence 

.......
































































......
Template Conservation    .......        
                     
   
    
       
   
 

 
  
           
Template Sequence  RK. . . . . . . LDAGVTVRFAPGYQDSSVPSNYPYLADWPKYTLFDLYASYKLTDSLTLRGSVENLTNRAYVVSYGETLANT
Template Known Secondary structure  T
.......





SS
TTSSS



SSSSS
TT
B



TT

TTT

Template Predicted Secondary structure 

.......


























Template SS confidence 















































































   778. 780.........790.........800.........810.........820.........830.........840.........850
 
   855....860...
Predicted Secondary structure  ......
Query SS confidence  . . . . . .








Query Sequence  . . . . . . TQAGVVWTF
Query Conservation  ......   
    
Alig confidence  ......








Template Conservation     

         
Template Sequence  LGRGRTVQGGVEYRF
Template Known Secondary structure 



S

Template Predicted Secondary structure 





Template SS confidence 














   851........860.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions