Job Description P33924 Confidence 100.00% Date Thu Jan 5 11:52:48 GMT 2012 Rank 2 Aligned Residues 266 % Identity 20% Template c3aehB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	T	D	V	L	N	M	A	A	A	Q	P	L	V	F	D	A	E	L	D	T	V	R	E	R	L	G	S	V	K	G	V	S	Y	D	T	A	M	W	S	S	A	I	N	T	R	N	N	V	T	T	D	A	G	A	G	F	E	Q	T	L	T	G	L	T	L	G	I	D	S	R	F	S	R	E	E	S	S	T
Query Conservation
Alig confidence																																																						.	.	.	.
Template Conservation																																																						.	.	.	.
Template Sequence		Q	G	K	A	A	A	T	F	M	H	I	S	Y	N	N	F	I	T	E	V	D	N	L	N	K	R	M	G	D	L	R	D	I	N	G	E	A	G	T	W	V	R	L	L	N	G	S	G	S	A	D	G	.	.	.	.	G	F	T	D	H	Y	T	L	L	Q	M	G	A	D	R	K	H	E	L	G	S	M	D	L
Template Known Secondary structure																				T												T	T				S															S	T	.	.	.	.	T																			T	T
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.					.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	G	L	I	F	G	Y	S	H	S	D	I	G	F	D	R	G	G	K	G	N	I	D	S	Y	T	L	G	A	Y	A	G	W	E	H	Q	N	G	A	Y	V	D	G	V	V	K	V	D	R	F	A	N	T	I	H	G	K	M	S	N	G	A	T	A	F	G	D	Y	N	S	N	G	A	G	A	H	V	E	S
Query Conservation
Alig confidence																.																																											.	.
Template Conservation																.																																											.	.
Template Sequence		F	T	G	V	M	A	T	Y	T	D	T	D	A	S	.	A	D	L	Y	S	G	K	T	K	S	W	G	G	G	F	Y	A	S	G	L	F	R	S	G	A	Y	F	D	V	I	A	K	Y	I	H	N	E	N	K	Y	D	L	.	.	N	F	A	G	A	G	K	Q	N	F	R	S	H	S	L	Y	A	G	A	E	V
Template Known Secondary structure																.		T	T																			T	T	S																			.	.	S	S	T	T
Template Predicted Secondary structure																.																																											.	.
Template SS confidence
		1156	.	.	.	1160	.	.	.	.	.	.	.	.	.		1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.			.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.
		724	.	.	.	.	.	730		.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		G	F	R	W	V	D	G	.	L	W	S	V	R	P	Y	L	A	F	T	G	F	T	T	D	G	Q	D	Y	T	L	S	N	G	M	R	A	D	V	G	N	T	R	I	L	R	A	E	A	G	T	A	V	S	Y	H	M	D	L	Q	N	G	T	T	L	E	P	W	L	K	A	A	V	R	Q	E	Y	A	D	S	N
Query Conservation									.
Alig confidence									.																							.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		G	Y	R	Y	H	L	T	D	T	T	F	V	E	P	Q	A	E	L	V	W	G	R	L	Q	G	Q	N	S	V	N	.	.	.	.	.	.	.	.	.	.	.	.	P	L	V	G	R	T	G	V	V	S	G	K	T	F	S	G	K	D	.	.	.	W	S	L	T	A	R	A	G	L	H	Y	E	F	D	L	T	D
Template Known Secondary structure									T	T																						.	.	.	.	.	.	.	.	.	.	.	.																	S	S	.	.	.																S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
		1233	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.													.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280				.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.
		803	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	K	V	N	D	D	G	K	F	N	N	D	V	A	G	T	S	G	V	Y	Q	A	G	I	R	S	S	F	T	P	T	L	S	G	H	L	S	V	S	Y	G	N	G	A	G	V	E	S	P	W	N	T	Q	A	G	V	V	W	T	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	R	K	D	S	R	M	L	Y	G	V	G	L	N	A	R	F	G	D	N	T	R	L	G	L	E	V	E	R	S	A	F	G	K	Y	N	T	D	D	A	I	N	A	N	I	R	Y	S	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																		T	T	T												S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														1313	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions