Job Description P33924 Confidence 97.10% Date Thu Jan 5 11:52:48 GMT 2012 Rank 24 Aligned Residues 204 % Identity 12% Template c3a2rX_ PDB info PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein ii; PDBTitle: crystal structure of outer membrane protein porb from neisseria2 meningitidis Resolution 2.30 Å

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		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	F	S	R	E	E	S	S	T	I	R	G	L	I	F	G	Y	S	H	S	D	I	G	F	D	R	G	G	K	G	N	I	D	S	Y	T	L	G	A	Y	A	G	W	E	H	Q	N	G	A	Y	V	D	G	V	V	K	V	D	R	F	A	N	T	I	H	G	K	M	S	N	G	A	T	A	F	G	D	Y	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Y	D	S	P	V	F	A	G	F	S	G	S	V	Q	Y	V	P	R	D	N	A	N	D	V	D	K	Y	K	H	T	K	S	S	R	E	S	Y	H	A	G	L	K	Y	E	N	A	G	F	F	G	Q	Y	A	G	S	F	A	K	Y	A	D	L	N	T	D	A	E	R	V	A	V	N	T	A	N	A	H	P	V
Template Known Secondary structure								B	T	T															S	T	T	S	S	S	T	T	S															T	T																	T	T	S		B			T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		714	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	G	A	G	A	H	V	E	S	G	F	R	W	V	D	G	L	W	S	V	R	P	Y	L	A	F	T	G	F	T	T	D	G	Q	D	Y	T	L	S	N	G	M	R	A	D	V	G	N	T	R	I	L	R	A	E	A	G	T	A	V	S	Y	H	M	D	L	Q	N	G	T	T	L	E	P	W	L	K	A	A
Query Conservation
Alig confidence																	.	.	.	.																													.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation																	.	.	.	.																													.	.	.	.	.	.	.	.	.														.	.	.
Template Sequence		K	D	Y	Q	V	H	R	V	V	A	G	Y	D	A	N	.	.	.	.	D	L	Y	V	S	V	A	G	Q	Y	E	A	A	K	N	N	E	V	G	S	I	K	G	K	K	H	E	Q	.	.	.	.	.	.	.	.	.	T	Q	V	A	A	T	A	A	Y	R	F	G	N	.	.	.	V	T	P	R	V	S	Y	A
Template Known Secondary structure																T	.	.	.	.	T																S	S	S	T	T	T	T						.	.	.	.	.	.	.	.	.											B	T	T	.	.	.
Template Predicted Secondary structure																	.	.	.	.																													.	.	.	.	.	.	.	.	.														.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.										.	.	260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.
		794	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.				.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		V	R	Q	E	Y	A	D	S	N	Q	V	K	V	N	D	D	G	K	F	N	N	D	V	A	G	T	S	G	V	Y	Q	A	G	I	R	S	S	F	T	P	T	L	S	G	H	L	S	V	S	Y	G	N	.	.	.	G	A	G	V	E	S	P	W	N	T	Q	A	G	V	V	W	T	F
Query Conservation																																																						.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.
Template Sequence		H	G	F	K	A	K	V	N	G	.	.	.	.	.	.	.	.	.	.	V	K	D	A	N	Y	Q	Y	D	Q	V	I	V	G	A	D	Y	D	F	S	K	R	T	S	A	L	V	S	A	G	W	L	K	Q	G	K	G	A	G	K	V	E	Q	T	A	S	M	V	G	L	R	H	K	F
Template Known Secondary structure									T	T	.	.	.	.	.	.	.	.	.	.				G	G	G													S	S	S	S													S	S	T	T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.											.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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