Job Description P33924 Confidence 8.71% Date Thu Jan 5 11:52:48 GMT 2012 Rank 60 Aligned Residues 203 % Identity 14% Template c2y0hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:probable porin; PDBTitle: crystal structure of pseudomonas aeruginosa opdl Resolution 2.20 Å

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		631	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.					660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		G	I	D	S	R	F	S	R	E	E	S	S	T	I	R	G	L	I	F	G	Y	S	H	S	D	I	G	F	D	.	.	.	.	R	G	G	K	G	N	I	D	S	Y	T	L	G	A	Y	A	G	W	E	H	Q	N	G	A	Y	V	D	G	V	V	K	V	D	R	F	A	N	T	I	H	G	K	M	S	N	G	A
Query Conservation																															.	.	.	.
Alig confidence																															.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	L	L	T	S	S	E	I	E	G	L	T	L	T	A	G	Q	L	W	K	S	R	T	R	E	S	D	D	M	Y	I	M	G	R	D	K	A	H	A	S	D	E	F	N	L	A	G	A	T	Y	A	F	T	P	R	L	S	A	S	Y	Y	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	T	T																			B		B	T	T	S		T	T	S		B	S											S	S	S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		707	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730		.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		T	A	F	G	D	Y	N	S	N	G	A	G	A	H	V	E	S	G	F	R	W	V	D	G	.	L	W	S	V	R	P	Y	L	A	F	T	G	F	T	T	D	G	Q	D	Y	T	L	S	N	G	M	R	A	D	V	G	N	T	R	I	L	R	A	E	A	G	T	A	V	S	Y	H	M	D	L	Q	N	G	T	T
Query Conservation																										.
Alig confidence		.	.	.																						.
Template Conservation		.	.	.
Template Sequence		.	.	.	G	Q	L	K	D	I	Y	R	Q	H	Y	L	G	L	L	H	T	L	P	L	G	E	G	L	S	L	R	S	D	L	R	Y	F	D	S	G	E	D	G	A	A	I	S	G	P	V	D	N	R	N	L	N	A	M	L	T	L	R	A	G	A	H	A	F	G	I	G	V	Q	K	M	I	G	N	D	A	F
Template Known Secondary structure		.	.	.				T	T	T															S	T	T																T	T		T	T																	T	T												S	S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		786	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.					.	.	.	.	.	.	.	840	.	.	.	.	.							.	.	.	.	850	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.														.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.														.	.	.	.	.	.
Query Sequence		L	E	P	W	L	K	A	A	V	R	Q	E	Y	A	D	S	N	Q	V	K	V	N	D	D	G	K	F	N	N	D	V	A	G	T	S	G	V	Y	Q	A	G	I	R	S	S	F	T	.	.	.	.	P	T	L	S	G	H	L	S	V	S	Y	G	N	.	.	.	.	.	.	G	A	G	V	E	S	P	W	N	T
Query Conservation																																																	.	.	.	.														.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.																																			.	.	.	.														.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	L	.	.	.	.	.	.	.	.	.	.	N	G	Y	T	T	P	Y	V	A	N	L	M	A	Y	Q	T	F	T	R	P	Q	E	K	S	W	Q	L	R	Y	D	Y	D	F	A	G	L	G	L	P	G	L	N	L	M	T	R	Y	V	Q	G	R	D	I	D	R	G	A	G	R	A	D	D	S	E	W	E	R
Template Known Secondary structure				B	.	.	.	.	.	.	.	.	.	.	T	T	T		B				T	T			S	S			S		S	T	T													T	T	T	T		T	T																S	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		275	.	.											.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		856	.	.	.	860	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	G	V	V	W	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	D	L	S	Y	V	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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