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Job DescriptionP33924
Confidence98.01%DateThu Jan 5 11:52:48 GMT 2012
Rank19Aligned Residues194
% Identity12%Templatec2x4mD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:coagulase/fibrinolysin; PDBTitle: yersinia pestis plasminogen activator pla
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   667..670.........680.........690... ......700...... ...710.........720.........730 ....
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Query Sequence  DSYTLGAYAGWEHQNGAYVDGVVKVDR. . FANTIHGKMSNGA. . . . . . . . . TAFGDYNSNGAGAHVESGFRWVDG. LWSV
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Template Sequence  NVAILKGDISWDPYSFLTLNARGWTSLASGSGNMDDYAWMNENQSEWTDHSSHPATNVNHANEYDLNVKGWLLQDENYKA
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STT
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   4950.........60.........70.........80.........90.........100.........110.........120........
 
   735....740.........750.... .....760.........770.........780.........790.........800.
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Query Sequence  RPYLAFTGFTTDGQDYTLSN. . . . . . . . . . . . . GMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADS
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Template Sequence  GITAGYQETRFSWTATGGSYSYNNGAYTGNFPKGVRVIGYNQRFSMPYIGLAGQYRIND. . . FELNALFKFSDWVRAHDN
Template Known Secondary structure  S
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   129130.........140.........150.........160.........170.........180....... ..190.........200.....
 
   802.......810.........820.........830.........840..... ....850......
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Query Sequence  NQVKVNDDGKFNNDVAGTSGVYQAGIRSSFTPTLSGHLSVSYGN. . . . . . . . . . . . . . . . . . . . . . . . . GAGVESPWNTQ
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Template Sequence  DEHYMRDLTFREKTSGSRYYGTVINAGYYVTPNAKVFAEFTYSKYDEGKGGTQTIDKNSGDSVSIGGDAAGISNKNYTVT
Template Known Secondary structure  GGGTTTTTT

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   206...210.........220.........230.........240.........250.........260.........270.........280.....
 
   857..860...
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Query Sequence  AGVVWTF
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Template Sequence  AGLQYRF
Template Known Secondary structure 
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   286...290..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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