Job Description P33924 Confidence 20.77% Date Thu Jan 5 11:52:48 GMT 2012 Rank 52 Aligned Residues 166 % Identity 10% Template c2k4tA_ PDB info PDB header:membrane protein,apoptosis Chain: A: PDB Molecule:voltage-dependent anion-selective channel PDBTitle: solution structure of human vdac-1 in ldao micelles Resolution UNK

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		683	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.				.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.		.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.		.	.
Predicted Secondary structure																										.	.	.																												.																							.
Query SS confidence																										.	.	.																												.																							.
Query Sequence		A	Y	V	D	G	V	V	K	V	D	R	F	A	N	T	I	H	G	K	M	S	N	G	A	.	.	.	T	A	F	G	D	Y	N	S	N	G	A	G	A	H	V	E	S	G	F	R	W	V	D	G	L	W	S	.	V	R	P	Y	L	A	F	T	G	F	T	T	D	G	Q	D	Y	T	L	S	N	G	.	M	R
Query Conservation																										.	.	.																												.																							.
Alig confidence																										.	.	.																												.																							.
Template Conservation
Template Sequence		A	K	I	K	T	G	Y	K	R	E	H	I	N	L	G	C	D	M	D	F	D	I	A	G	P	S	I	R	G	A	L	V	L	G	Y	E	G	W	L	A	G	Y	Q	M	N	F	E	T	A	K	S	R	V	T	Q	S	N	F	A	V	G	Y	K	T	D	E	F	Q	L	H	T	N	V	N	D	G	T	E	F	G
Template Known Secondary structure											S	S										S	S	S	S												T	T											T	T	T	T	S													S	S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		758	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	V	G	N	T	R	I	L	R	A	E	A	G	T	A	V	S	Y	H	M	D	L	Q	N	G	T	T	L	E	P	W	L	K	A	A	V	R	Q	E	Y	A	D	S	N	Q	V	K	V	N	D	D	G	K	F	N	N	D	V	A	G	T	S	G	V	Y	Q	A	G	I	R	S	S	F	T	P	T	L	S	G
Query Conservation
Alig confidence																											.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Sequence		G	S	I	Y	Q	K	V	N	K	K	L	E	T	A	V	N	L	A	W	T	A	G	N	S	N	.	.	.	.	.	T	R	F	G	I	A	A	K	Y	Q	I	D	P	D	A	C	F	S	A	K	V	N	.	.	.	.	.	.	.	.	.	N	S	S	L	I	G	L	G	Y	T	Q	T	L	K	P	G	I	K	L
Template Known Secondary structure									S	T	T											T	T	S	S		.	.	.	.	.													T	T									.	.	.	.	.	.	.	.	.	S	S	S											S	S	S
Template Predicted Secondary structure																											.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.										.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		838	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	S	V	S	Y	G	N	G	A	G	V	E	S	P	W	N	T	Q	A	G	V	V	W	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	S	A	L	L	D	G	K	N	V	N	A	G	G	H	K	L	G	L	G	L	E	F	Q
Template Known Secondary structure								S	T	T		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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