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Job DescriptionP33924
Confidence99.11%DateThu Jan 5 11:52:48 GMT 2012
Rank12Aligned Residues171
% Identity19%Templatec2k0lA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles.
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   679680.........690.........700.........710.........720.........730.........740.........750........
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Query Sequence  HQNGAYVDGVVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDGQDYTLSNGMRA
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Template Sequence  KDNTWYAGGKLGWSQYHDT. GFYGNGFQNNNGPTRNDQLGAGAFGGYQV. . . . . . . NPYLGFEMGYDWLGRMAYKGS. . V
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   15....20.........30... ......40.........50.........60.. .......70.........80... .
 
   759760.........770.........780.........790.........800.........810.........820.........830........
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Query Sequence  DVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVNDDGKFNNDVAGTSGVYQAGIRSSFTPTLSGH
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Template Sequence  DNGAFKAQGVQLTAKLGYPITDD. . . . LDIYTRLGGMVWRADSKGNYASTGVSRSEHDTGVSPVFAGGVEWAVTRDIATR
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   85....90.........100....... ..110.........120.........130.........140.........150.........160
 
   839840.........850... ......860...
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Query Sequence  LSVSYGNGAGVESPW. . . . . . . NTQAGVVWTF
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Template Sequence  LEYQWVNNIGDAGTVGTRPDNGMLSLGVSYRF
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   161........170.........180.........190..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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