Job Description P33924 Confidence 98.41% Date Thu Jan 5 11:52:48 GMT 2012 Rank 17 Aligned Residues 239 % Identity 12% Template c2iwvD_ PDB info PDB header:ion channel Chain: D: PDB Molecule:outer membrane protein g; PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation Resolution 2.3 Å

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		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	V	S	Y	D	T	A	M	W	S	S	A	I	N	T	R	N	N	V	T	T	D	A	G	A	G	F	E	Q	T	L	T	G	L	T	L	G	I	D	S	R	F	S	R	E	E	S	S	T	I	R	G	L	I	F	G	Y	S	H	S	D	I	G	F	D	R	G	G	K	G	N	I	D	S	Y	T	L	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	A	N	G	P	W	R	I	A	L	A	Y	Y	Q	E	G	P	V	D	Y	S	A	G	K	R	G	T	W	F	D	R	P	E	L	E	V	H	Y	Q	F	L	E	N	D	D	F	S	F	G	L	T	G	G	F	R	N	Y	G	Y	H	Y	V	D	E	P	G	K	D	T	A	N	M	Q	R	W	K	I	A	P
Template Known Secondary structure						T	T															T	T	T	T				S																	S	S																	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		674	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730		.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		Y	A	G	W	E	H	Q	N	G	A	Y	V	D	G	V	V	K	V	D	R	F	A	N	T	I	H	G	K	M	S	N	G	A	T	A	F	G	D	Y	N	S	N	G	A	G	A	H	V	E	S	G	F	R	W	V	D	G	.	L	W	S	V	R	P	Y	L	A	F	T	G	F	T	T	D	G	Q	D	Y	T	L
Query Conservation																																																											.
Alig confidence																												.	.	.	.	.	.	.	.	.																							.													.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		D	W	D	V	K	L	T	D	D	L	R	F	N	G	W	L	S	M	Y	K	F	A	N	D	L	N	.	.	.	.	.	.	.	.	.	T	T	G	Y	A	D	T	R	V	E	T	E	T	G	L	Q	Y	T	F	N	E	T	V	A	L	R	V	N	Y	Y	L	E	R	G	F	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	S	S														S				.	.	.	.	.	.	.	.	.						S														S	S	S	B													.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.										.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		753	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	G	M	R	A	D	V	G	N	T	R	I	L	R	A	E	A	G	T	A	V	S	Y	H	M	D	L	Q	N	G	T	T	L	E	P	W	L	K	A	A	V	R	Q	E	Y	A	D	S	N	Q	V	K	V	N	D	D	G	K	F	N	N	D	V	A	G	T	S	G	V	Y	Q	A	G	I	R	S	S	F	T
Query Conservation
Alig confidence		.	.	.	.																											.																								.	.	.	.	.	.	.
Template Conservation		.	.	.	.																											.																								.	.	.	.	.	.	.
Template Sequence		.	.	.	.	N	M	D	D	S	R	N	N	G	E	F	S	T	Q	E	I	R	A	Y	L	P	L	T	L	G	N	.	H	S	V	T	P	Y	T	R	I	G	L	D	R	W	S	N	W	D	W	Q	D	D	I	.	.	.	.	.	.	.	E	R	E	G	H	D	F	N	R	V	G	L	F	Y	G	Y	D	F	Q
Template Known Secondary structure		.	.	.	.		S	S	T	T			T	T																T	T	.																	T	T	T	T	T			.	.	.	.	.	.	.	S																		S
Template Predicted Secondary structure		.	.	.	.																											.																								.	.	.	.	.	.	.
Template SS confidence
						178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.								.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		833	.	.	.	.	.	.	840	.	.	.	.	.					.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		P	T	L	S	G	H	L	S	V	S	Y	G	N	.	.	.	.	G	A	G	V	E	S	P	W	N	T	Q	A	G	V	V	W	T	F
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.
Template Conservation
Template Sequence		N	G	L	S	V	S	L	E	Y	A	F	E	W	Q	D	H	D	E	G	D	S	D	K	F	H	Y	A	G	V	G	V	N	Y	S	F
Template Known Secondary structure		S	S															S	S	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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