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Job DescriptionP33924
Confidence19.38%DateThu Jan 5 11:52:48 GMT 2012
Rank53Aligned Residues228
% Identity12%Templatec2grxB_
PDB info PDB header:metal transportChain: B: PDB Molecule:ferrichrome-iron receptor; PDBTitle: crystal structure of tonb in complex with fhua, e. coli2 outer membrane receptor for ferrichrome
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   621........630.........640.........650.........660.........670.........680.........690.........700
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Query Sequence  FEQTLTGLTLGIDSRFSREESSTIRGLIFGYSHSDIGFDRGGKGNIDSYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHG
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Template Sequence  RDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPED. RPIVVTGAVYNLTKTNNL
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TTS




B
TTSSB




SS.S
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   482.......490.........500.........510.........520.........530.........540.. .......550.........560
 
   701........710.........720.........730.........740.........750.........760.........770.........780
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Query Sequence  KMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDGQDYTLSNGMRADVGNTRILRAEAGTAVSYHMDL
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Template Sequence  MADPEGSFFSVEGGEIRARGVEIEAKAALSAS. VNVVGSYTYTDAEYTTDTTYKGNTPAQVPKH. . . . MASLWADYTFFD
Template Known Secondary structure 
TTT
SS

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TTTTT


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   561........570.........580.........590.. .......600.........610.........620... ......630.....
 
   781........790.........800.........810.........820.........830... ......840.. .......
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Query Sequence  QNGTTLEPWLKAAVRQEYADSNQVKVNDDGKFNNDVAGTSGVYQAGIRSSFTP. . . . TLSGHLSVS. . . . . . . YGNGAGV
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Template Conservation               
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Template Sequence  GPLSGLTLGTGGRYTGSSYGDPA. . . . . . . . . NSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDREYVASCFNT
Template Known Secondary structure  STTTT


SSTT.........

S

GGGGT
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SST
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   636...640.........650........ .660.........670.........680.........690.........700......
 
   850... ......860...
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Query Sequence  ESPW. . . . . NTQAGVVWTF
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Template Conservation         

       
 
Template Sequence  YGCFWGAERQVVATATFRF
Template Known Secondary structure  T






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   707..710.........720.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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