Job Description P33924 Confidence 98.89% Date Thu Jan 5 11:52:48 GMT 2012 Rank 13 Aligned Residues 164 % Identity 10% Template c2f1tB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw Resolution 3.00 Å

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		679	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	N	G	A	Y	V	D	G	V	V	K	V	D	R	F	A	N	T	I	H	G	K	M	S	N	G	A	T	A	F	G	D	Y	N	S	N	G	A	G	A	H	V	E	S	G	F	R	W	V	D	G	L	W	S	V	R	P	Y	L	A	F	T	G	F	T	T	D	G	Q	D	Y	T	L	S	N	G	M	R	A
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.													.															.							.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.													.															.							.	.	.	.
Template Sequence		E	A	G	E	F	F	M	R	A	G	S	A	T	.	.	.	.	.	.	.	.	.	.	V	R	P	T	E	G	G	G	F	S	V	T	.	N	N	T	Q	L	G	L	T	F	T	Y	M	A	T	.	D	N	I	G	V	E	.	.	.	.	L	L	A	A	T	P	F	R	H	K	I	G	T	R	A	T	G	D	I
Template Known Secondary structure			T	T											.	.	.	.	.	.	.	.	.	.													.															.	T	T					.	.	.	.					S									T	T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.													.															.							.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.											.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		759	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.				820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		D	V	G	N	T	R	I	L	R	A	E	A	G	T	A	V	S	Y	H	M	D	L	Q	N	G	T	T	L	E	P	W	L	K	A	A	V	R	Q	E	Y	A	D	S	N	Q	V	K	V	N	D	D	G	K	F	N	N	D	V	A	G	T	.	.	.	S	G	V	Y	Q	A	G	I	R	S	S	F	T	P	T	L
Query Conservation																																																															.	.	.
Alig confidence									.	.	.	.														.																																					.	.	.
Template Conservation									.	.	.	.														.
Template Sequence		A	T	V	H	H	L	P	.	.	.	.	P	T	L	M	A	Q	W	Y	F	G	D	A	S	.	S	K	F	R	P	Y	V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D	H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	V	D	Y	L	I	N	R	D	W
Template Known Secondary structure									.	.	.	.										S		T	T	.		S																										T	T																							S	S	S
Template Predicted Secondary structure									.	.	.	.														.
Template SS confidence
		74	.	.	.	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		836	.	.	.	840	.	.	.	.	.																.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	H	L	S	V	S	Y	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	G	V	E	S	P	W	N	T	Q	A	G	V	V	W	T	F
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	N	M	S	V	W	Y	M	D	I	D	T	T	A	N	Y	K	L	G	G	A	Q	Q	H	D	S	V	R	L	D	P	W	V	F	M	F	S	A	G	Y	R	F
Template Known Secondary structure																					S	S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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