Job Description P33924 Confidence 8.49% Date Thu Jan 5 11:52:48 GMT 2012 Rank 61 Aligned Residues 255 % Identity 11% Template c1xkhC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:ferripyoverdine receptor; PDBTitle: pyoverdine outer membrane receptor fpva from pseudomonas aeruginosa2 pao1 bound to pyoverdine Resolution 3.60 Å

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		596	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.					.	.	.	.	.	670	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		V	S	Y	D	T	A	M	W	S	S	A	I	N	T	R	N	N	V	T	T	D	A	G	A	G	F	E	Q	T	L	T	G	L	T	L	G	I	D	S	R	F	S	R	E	E	S	S	T	I	R	G	L	I	F	G	Y	S	H	S	D	I	G	F	D	R	G	G	K	G	.	.	.	.	N	I	D	S	Y	T	L
Query Conservation																																																																							.	.	.	.
Alig confidence																																																																							.	.	.	.
Template Conservation
Template Sequence		V	T	D	D	L	N	L	F	L	G	G	R	V	V	D	Y	R	V	T	G	L	N	P	T	I	R	E	S	G	R	F	I	P	Y	V	G	A	V	Y	D	L	N	D	T	Y	S	V	Y	A	S	Y	T	D	I	F	X	P	Q	D	S	W	Y	R	D	S	S	N	K	L	L	E	P	D	E	G	Q	N	Y	E	I
Template Known Secondary structure		S	S	S	S																S	S	S	S																			S	S	S																T	T				S	S	S
Template Predicted Secondary structure
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.							710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.
Query Sequence		G	A	Y	A	G	W	E	H	Q	N	G	A	Y	V	D	G	V	V	K	V	D	R	F	A	N	T	I	H	G	K	M	S	N	G	A	T	A	F	.	.	.	.	.	.	G	D	Y	N	S	N	G	A	G	A	H	V	E	S	G	F	R	W	V	D	G	L	W	S	V	R	P	Y	L	A	F	T	G	F	T	T
Query Conservation																																								.	.	.	.	.	.
Alig confidence												.																												.	.	.	.	.	.																								.
Template Conservation												.																																																									.
Template Sequence		G	I	K	G	E	Y	L	D	G	R	.	L	N	T	S	L	A	Y	F	E	I	H	E	E	N	R	A	E	E	D	A	L	Y	N	S	K	P	T	N	P	A	I	T	Y	A	Y	K	G	I	K	A	K	T	K	G	Y	E	A	E	I	S	G	E	L	A	P	G	.	W	Q	V	Q	A	G	Y	T	H	K	I	I
Template Known Secondary structure								T	T	T	T	.																				S	S	T	T	S					T	T		S																					S	S	S	S	.
Template Predicted Secondary structure												.																																																									.
Template SS confidence
		619	620	.	.	.	.	.	.	.	.		.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.		.	.	.	.	.	690	.	.	.	.	.	.
		746	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	Q	D	Y	T	L	S	N	G	M	R	A	D	V	G	N	T	R	I	L	R	A	E	A	G	T	A	V	S	Y	H	M	D	L	Q	N	G	T	T	L	E	P	W	L	K	A	A	V	R	Q	E	Y	A	D	S	N	Q	V	K	V	N	D	D	G	K	F	N	N	D	V	A	G	T	S	G	V	Y	Q	A
Query Conservation
Alig confidence											.	.	.	.	.	.																							.	.	.	.	.
Template Conservation											.	.	.	.	.	.																							.	.	.	.	.
Template Sequence		R	D	D	S	G	K	K	V	S	.	.	.	.	.	.	T	W	E	P	Q	D	Q	L	S	L	Y	T	S	Y	K	F	K	G	A	L	D	K	.	.	.	.	.	L	T	V	G	G	G	A	R	W	Q	G	K	S	W	Q	X	V	Y	N	N	P	R	S	R	W	E	K	F	S	Q	E	D	Y	W	L	V	D	L
Template Known Secondary structure				T	T			B			.	.	.	.	.	.	T	T	S		S													G	G	G	T	T	.	.	.	.	.																				G	G	G
Template Predicted Secondary structure											.	.	.	.	.	.																							.	.	.	.	.
Template SS confidence
		697	.	.	700	.	.	.	.	.							.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.						.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.
		826	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.							.	.	.	.	.	.	.	850	.	.	.							.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.												.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.												.	.	.	.	.	.
Query Sequence		G	I	R	S	S	F	T	P	T	L	S	G	H	L	S	V	S	.	.	.	.	.	.	Y	G	N	G	A	G	V	E	S	P	W	.	.	.	.	.	.	N	T	Q	A	G	V	V	W	T	F
Query Conservation																			.	.	.	.	.	.												.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation
Template Sequence		X	A	R	Y	Q	I	T	D	K	L	S	A	S	V	N	V	N	N	V	F	D	K	T	Y	Y	T	N	I	G	F	Y	T	S	A	S	Y	G	D	P	R	N	L	X	F	S	T	R	W	D	F
Template Known Secondary structure								S	S	S								T	T	T	T								S		S	S	S								S								S
Template Predicted Secondary structure
Template SS confidence
		766	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions