Job Description P04079 Confidence 99.86% Date Thu Jan 5 10:58:10 GMT 2012 Rank 55 Aligned Residues 187 % Identity 16% Template d2abwa1 SCOP info Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) Resolution 1.62

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.									.	70	.	.	.	.	.	.
Predicted Secondary structure												.																																																						.	.	.	.	.	.	.	.
Query SS confidence												.																																																						.	.	.	.	.	.	.	.
Query Sequence		H	K	H	R	I	L	I	L	D	F	.	G	S	Q	Y	T	Q	L	V	A	R	R	V	R	E	L	G	V	Y	C	E	L	W	A	W	D	V	T	E	A	Q	I	R	D	F	N	P	S	G	I	I	L	S	G	G	P	E	S	T	T	E	E	N	S	.	.	.	.	.	.	.	.	P	R	A	P	Q	Y	V	F
Query Conservation												.																																																						.	.	.	.	.	.	.	.
Alig confidence												.								.	.																								.	.																				.	.	.	.	.	.	.	.
Template Conservation																				.	.																								.	.
Template Sequence		S	E	I	T	I	G	V	L	S	L	Q	G	D	F	E	P	H	I	.	.	N	H	F	I	K	L	Q	I	P	S	L	N	I	I	Q	V	R	N	V	H	D	L	G	.	.	L	C	D	G	L	V	I	P	G	G	E	S	T	T	V	R	R	C	C	A	Y	E	N	D	T	L	Y	N	A	L	V	H	F	I	H
Template Known Secondary structure											T	T	S							.	.					T	T			T	T								S						.	.	T		S							S									T	T
Template Predicted Secondary structure																				.	.																								.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.												.	.	.																																.
Query SS confidence																																	.	.	.												.	.	.																																.
Query Sequence		E	A	G	V	P	V	F	G	V	C	Y	G	M	Q	T	M	A	M	Q	L	G	G	H	V	E	A	S	N	E	R	E	.	.	.	F	G	Y	A	Q	V	E	V	V	N	D	.	.	.	S	A	L	V	R	G	I	E	D	A	L	T	A	D	G	K	P	L	L	D	V	W	M	S	H	G	D	K	V	T	A	.
Query Conservation																																	.	.	.												.	.	.																																.
Alig confidence																																	.	.	.												.	.	.																																.
Template Conservation
Template Sequence		V	L	K	K	P	I	W	G	T	C	A	G	C	I	L	L	S	K	N	V	E	N	I	K	L	Y	S	N	F	G	N	K	F	S	F	G	G	L	D	I	T	I	C	R	N	F	N	D	S	F	I	C	S	L	N	I	I	S	D	S	S	A	F	K	K	D	L	T	A	A	C	I	R	A	P	Y	I	R	E	I
Template Known Secondary structure		T	S								T						T									S			T	T	G	G	G	S																												T	T			T	T							S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		I	P	S	D	F	I	T	V	A	S	T	E	S	C	P	.	.	.	.	.	F	A	I	M	A	N	E	E	K	R	F	Y	G	V	Q	F	H	P	E	V	T	H	T	R	Q	G	M	R	M	L	E	R	F	V	R	D	I
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.								.	.																	.	.	.
Template Conservation																													.	.																	.	.	.
Template Sequence		L	S	D	E	V	K	V	L	A	T	F	S	H	E	S	Y	G	P	N	I	I	A	A	V	E	Q	N	.	.	N	C	L	G	T	V	F	H	P	E	L	L	P	H	T	A	.	.	.	F	Q	Q	Y	F	Y	E	K	V
Template Known Secondary structure				T	T										T	T	T											T	.	.	T					S	S		G	G	G	S	S				.	.	.
Template Predicted Secondary structure																													.	.																	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions