Job Description P04079 Confidence 99.93% Date Thu Jan 5 10:58:10 GMT 2012 Rank 38 Aligned Residues 184 % Identity 23% Template d1vcoa1 SCOP info Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) Resolution 2.15

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		9	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure							.	.	.	.																															.							.	.
Query SS confidence							.	.	.	.																															.							.	.
Query Sequence		R	I	L	I	L	.	.	.	.	D	F	G	S	Q	Y	T	Q	L	V	A	R	R	V	R	E	L	G	V	Y	C	E	L	W	A	W	D	V	T	E	.	A	Q	I	R	D	F	.	.	N	P	S	G	I	I	L	S	G	G	P	E	S	T	T	E	E	N	S	P	R	A	P	Q	Y	V	F	E	A	G	V	P
Query Conservation							.	.	.	.																															.							.	.
Alig confidence							.	.	.	.																															.							.	.
Template Conservation
Template Sequence		K	I	A	I	A	G	K	Y	V	D	A	Y	L	S	L	L	E	A	L	R	H	A	G	I	K	N	R	A	R	V	E	V	K	W	V	D	A	E	S	L	A	D	L	E	E	A	F	R	D	V	S	G	I	L	V	P	G	G	F	G	V	R	G	I	E	G	K	V	R	A	A	Q	Y	A	R	E	R	K	I	P
Template Known Secondary structure								S				T	T														T	T										G	G	G								T	T	T		S									S	S	T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																												.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	G	V	C	Y	G	M	Q	T	M	A	M	Q	L	G	G	H	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	N	E	R	E	F	G	Y	A	Q	V	E	V	V	N	D	S	A	L	V	R	G	I	E	D	A	L	T	A	D	G	K
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		Y	L	G	I	C	L	G	L	Q	I	A	V	I	E	F	A	R	N	V	A	G	L	K	G	A	N	S	T	E	F	D	P	H	T	P	H	P	V	I	D	L	M	P	E	Q	L	E	V	G	G	T	M	R	L	G	D	W	P	M	R	I	K	P	G	T	L	L	H	R	L	Y	G	K	E	E	V	.	.	.	.
Template Known Secondary structure						T														T	S			T	T				T	T	T		T	T		S							S		G	G	G																	T	T	S									S			.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.							.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.														.	.	.	.	.	.																	.													.
Query SS confidence															.	.	.	.	.	.														.	.	.	.	.	.																	.													.
Query Sequence		P	L	L	D	V	W	M	S	H	G	D	K	V	.	.	.	.	.	.	T	A	I	P	S	D	F	I	T	V	A	S	T	.	.	.	.	.	.	E	S	C	P	F	A	I	M	A	N	E	E	K	R	F	Y	.	G	V	Q	F	H	P	E	V	T	H	T	R	.	Q	G	M	R	M	L	E	R	F	V	R
Query Conservation															.	.	.	.	.	.														.	.	.	.	.	.																	.													.
Alig confidence		.	.	.											.	.	.	.	.	.														.	.	.	.	.	.																	.													.
Template Conservation		.	.	.
Template Sequence		.	.	.	L	E	R	H	R	H	R	Y	E	V	N	P	L	Y	V	D	G	L	E	R	A	G	L	V	V	S	A	T	T	P	G	M	R	G	R	G	A	G	L	V	E	A	I	E	L	K	D	H	P	F	F	L	G	L	Q	S	H	P	E	F	K	S	R	P	M	R	P	S	P	P	F	V	G	F	V	E
Template Known Secondary structure		.	.	.							S															T										B	T	T	B	S	T	T								T	T	S	S	S					S	S		G	G	G	G		B	T	T	B
Template Predicted Secondary structure		.	.	.
Template SS confidence
					466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions