 |
Job Description | P04079 | Confidence | 28.75% | Date | Thu Jan 5 10:58:10 GMT 2012 |
Rank | 353 | Aligned Residues | 106 |
% Identity | 15% | Template | d1qh8a_ |
SCOP info | Chelatase-like
| "Helical backbone" metal receptor
| Nitrogenase iron-molybdenum protein
|
Resolution | 1.60 |
|
 |
  |   |
182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | E | V | T | H | T | R | Q | G | M | R | M | L | E | R | F | V | R | D | I | C | Q | C | E | A | L | W | T | P | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | I | I | D | D | A | V | A | R | I | R | E | Q | V | G | D | D | K | V | I | L | G | L | S | G | G | V | D | S | S | V | T | A | M | L | L | H | R | A | I |
Query Conservation |   |
|
|
|   |   |
|   |   |
|   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |
|   |
|
|   |   |
|   |   |   |
|
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|   |
|   | . | . |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|
Template Sequence |   |
P | W | M | E | Y | N | F | F | G | P | T | K | I | A | E | S | L | R | K | I | A | D | Q | F | D | D | T | I | R | A | N | A | E | A | V | I | A | R | Y | E | G | Q | M | A | A | I | I | A | K | Y | R | P | R | L | E | G | R | K | V | L | L | Y | . |
. |
M | G | G | L | R | P | R | H | V | I | G | A | Y | E | D | L |
Template Known Secondary structure |   |
|  |  |  |
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | . | . |  | S | S | S |  |  |  |  | T |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
291 | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | |
|
. | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . |
  |
  |   |
252 | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | N | L | T | C | V | F | V | D | N | G | L | L | R | L | N | E | A | E | Q | V | L | D | M | F | G | D | H | F | G | L | N | I | V | H | V | P | A | E | D | R | F | L |
Query Conservation |   |
|   |   |
|   |   |
|   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |   |
|
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |
|
Template Sequence |   |
G | M | E | I | I | A | A | G | Y | E | F | A | H | . |
. |
. |
. |
. |
. |
N | D | D | Y | D | R | T | L | P | D | L | K | E | G | T | L | L | F | D | D | A | S | S | Y | E |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  |  | S | S |
|
| . | . | . | . | . | . |  |  |  |  |  |  |  | G | G | G |
|
| T | T |
|  |  |  |  | S |
| B |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
369 | 370 | . | . | . | . | . | . | . | . | . | 380 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|