Job Description P04079 Confidence 99.92% Date Thu Jan 5 10:58:10 GMT 2012 Rank 41 Aligned Residues 214 % Identity 19% Template d1l9xa_ SCOP info Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.											.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.								.																														.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.								.																														.	.
Query Sequence		K	H	R	I	L	I	L	.	.	.	.	.	.	.	.	.	.	D	F	G	S	Q	Y	T	.	Q	L	V	A	R	R	V	R	E	L	G	V	Y	C	E	L	W	A	W	D	V	T	E	A	Q	I	R	D	F	.	.	N	P	S	G	I	I	L	S	G	G	P	E	S	T	T	E	E	N	S	P	R	A	P	Q
Query Conservation									.	.	.	.	.	.	.	.	.	.								.																														.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.								.																														.	.
Template Conservation
Template Sequence		K	P	I	I	G	I	L	M	Q	K	C	R	N	K	V	M	K	N	Y	G	R	Y	Y	I	A	A	S	Y	V	K	Y	L	E	S	A	G	A	R	V	V	P	V	R	L	D	L	T	E	K	D	Y	E	I	L	F	K	S	I	N	G	I	L	F	P	G	G	S	V	D	L	R	R	S	D	Y	A	K	V	A	K
Template Known Secondary structure														S					T	T		S														T	T								S	S													S	S											T	T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80										.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																																							.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.																																							.	.	.	.
Query Sequence		Y	V	F	E	A	G	V	.	.	.	.	.	.	.	.	.	P	V	F	G	V	C	Y	G	M	Q	T	M	A	M	Q	L	G	G	H	V	E	A	S	N	E	R	E	F	G	Y	A	Q	V	E	V	V	N	D	.	.	.	.	S	A	L	V	R	G	I	E	D	A	L	T	A	D	G	K	P	L	L	D	V	W
Query Conservation									.	.	.	.	.	.	.	.	.																																							.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.																																							.	.	.	.
Template Conservation
Template Sequence		I	F	Y	N	L	S	I	Q	S	F	D	D	G	D	Y	F	P	V	W	G	T	C	L	G	F	E	E	L	S	L	L	I	S	G	E	C	L	L	T	A	T	D	T	V	D	V	A	M	P	L	N	F	T	G	G	Q	L	H	S	R	M	F	Q	N	F	P	T	E	L	L	L	S	L	A	V	E	P	L	T	A
Template Known Secondary structure													T	T									T												S	S																			S	T	T	T	T		S	T	T	T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.									.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.															.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.																	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.																	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	H	G	D	K	V	.	.	.	.	.	.	.	.	T	A	I	P	S	D	F	I	T	V	A	S	T	E	S	C	.	.	.	P	F	A	I	M	A	N	E	E	K	R	F	Y	G	V	Q	F	H	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	H	T	R	Q	G	M	R	M	L	E
Query Conservation									.	.	.	.	.	.	.	.																	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	F	H	K	W	S	L	S	V	K	N	F	T	M	N	E	K	L	K	K	F	F	N	V	L	T	T	N	T	D	G	K	I	E	F	I	S	T	M	E	G	Y	K	Y	P	V	Y	G	V	Q	W	H	P	E	K	A	P	Y	E	W	K	N	L	D	G	I	S	H	A	P	N	A	V	K	T	A	F	Y	L	A
Template Known Secondary structure									B						T																S	S	S										S	S	S						S	S		T	T							S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	V	R	D	I	C	Q	C	E	A	L	W	T	P	A	K	I	I	D	D	A	V	A	R	I
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		E	F	F	V	N	E	A	R	.	K	N	N	H	H	F	K	S	E	S	E	E	E	K	A	L	I
Template Known Secondary structure									T	.	T	S					S	S								S	G
Template Predicted Secondary structure										.
Template SS confidence
		249	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions