Job Description P04079 Confidence 99.95% Date Thu Jan 5 10:58:10 GMT 2012 Rank 30 Aligned Residues 175 % Identity 17% Template d1ka9h_ SCOP info Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) Resolution 2.30

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																												.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.
Query Sequence		H	R	I	L	I	L	D	F	G	S	Q	Y	T	Q	L	V	A	R	R	V	R	E	L	G	V	Y	C	E	L	W	A	W	D	V	T	E	A	Q	I	R	D	F	N	P	S	G	I	I	L	S	G	G	P	E	S	T	T	E	.	.	.	.	.	.	E	N	S	P	R	A	P	Q	Y	V	F	E	A	G	V	P
Query Conservation																																																												.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.																	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.
Template Sequence		M	K	A	L	L	I	D	Y	G	S	G	N	L	R	S	A	A	K	A	L	E	A	A	G	F	S	V	A	V	A	Q	D	P	K	A	H	E	.	.	.	.	.	E	A	D	L	L	V	L	P	G	Q	G	H	F	G	Q	V	M	R	A	F	Q	E	S	G	F	V	E	R	V	R	R	H	L	E	R	G	L	P
Template Known Secondary structure									S	S		S												T	T							S	S	T	T	S		S	.	.	.	.	.	S		S								S								T	T	S	S	S		T										T	T
Template Predicted Secondary structure																																							.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.													.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	G	V	C	Y	G	M	Q	T	M	A	M	Q	.	.	.	.	.	.	.	.	.	.	.	.	L	G	G	H	V	E	A	S	N	E	R	E	F	G	Y	A	Q	V	E	V	V	N	D	S	A	L	V	R	G	I	E	D	A	L	T	A	D	G	K	P	L	L	D	V	W	M	S	H	G	D	K	V	T	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.
Template Sequence		F	L	G	I	C	V	G	M	Q	V	L	Y	E	G	S	E	E	A	P	G	V	R	G	L	G	L	V	P	G	E	V	R	R	F	R	A	G	R	V	P	Q	M	G	W	N	A	L	E	F	G	G	A	F	A	P	L	T	G	R	.	.	.	.	.	.	.	.	.	H	F	Y	F	A	N	S	Y	Y	G	P	L
Template Known Secondary structure						T					T	T	S	S			T	T	S	T	T						S	S	S	S							S	S	S	S	S											G	G	G	G	G	G	T	T		.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.										.	.	.	140	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	S	D	F	I	T	V	A	S	T	E	S	C	P	F	A	I	M	A	N	E	E	K	R	F	Y	G	V	Q	F	H	P	E	V	T	H	T	R	Q	G	M	R	M	L	E	R	F	V	R
Query Conservation
Alig confidence																						.	.															.
Template Conservation																						.	.															.
Template Sequence		T	P	Y	S	L	G	K	G	E	Y	E	G	T	P	F	T	A	L	L	A	.	.	K	E	N	L	L	A	P	Q	F	H	P	E	K	S	.	G	K	A	G	L	A	F	L	A	L	A	R	R
Template Known Secondary structure			T	T								T	T									.	.		S	S					S	S		T	T	S	S	.
Template Predicted Secondary structure																						.	.															.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions