Job Description P04079 Confidence 28.44% Date Thu Jan 5 10:58:10 GMT 2012 Rank 360 Aligned Residues 70 % Identity 10% Template d1jx6a_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 1.50

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		9	10	.	.	.								.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.												.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure							.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	L	I	L	.	.	.	.	.	.	.	D	F	G	S	Q	Y	T	Q	L	V	A	R	R	V	R	E	L	G	V	Y	C	E	L	W	A	W	D	V	T	.	.	.	.	.	.	.	.	.	.	.	E	A	Q	I	R	D	F	N	P	S	G	I	I	L	S	G	G	P	E	S	T	T	E	E	N	S	P	R
Query Conservation							.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.
Template Sequence		K	I	S	V	V	Y	P	G	Q	Q	V	S	D	Y	W	V	R	N	I	A	S	F	E	K	R	L	Y	K	L	N	I	N	Y	Q	L	N	Q	V	F	T	R	P	N	A	D	I	K	Q	Q	S	L	S	L	M	E	A	L	K	S	K	S	D	Y	L	I	F	T	L	.	.	.	.	.	D	T	T	R	H	R	K
Template Known Secondary structure											S	S																		T	T												T	T																T	T		S							.	.	.	.	.	S	S	S	T	T
Template Predicted Secondary structure																																																																						.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	Q	Y	V	F	E	A	G	V	P	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	E	H	V	L	D	S	T	N	T	K	L
Template Known Secondary structure											S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions