Job Description P04079 Confidence 26.82% Date Thu Jan 5 10:58:10 GMT 2012 Rank 384 Aligned Residues 182 % Identity 13% Template d1ea0a2 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 3.0

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	T	P	A	K	I	I	D	D	A	V	A	R	I	R	E	Q	V	G	D	D	K	V	I	L	G	L	S	G	G	V	D	S	S	V	T	A	M	L	L	H	R	A	I	G	K	N	L	T	C	V	F	V	D	N	G	L	L	R	L	N	E	A	E	Q	V	L	D	M	F	G	D	H	F	G	L	N	I	V	H
Query Conservation
Alig confidence							.																																						.																					.	.	.	.	.										.	.
Template Conservation							.																																						.																					.	.	.	.	.										.	.
Template Sequence		Y	S	I	E	D	.	L	A	Q	L	I	Y	D	L	K	Q	I	N	P	D	A	K	V	T	V	K	L	V	S	R	S	G	I	G	T	I	A	A	G	V	A	K	A	.	N	A	D	I	I	L	I	S	G	N	S	G	G	T	G	A	S	P	Q	T	.	.	.	.	.	S	I	K	F	A	G	L	P	W	.	.
Template Known Secondary structure		S	S				.													T	T											T	T											T	.	T		S							T	T				S	S			T	T	.	.	.	.	.					S					.	.
Template Predicted Secondary structure							.																																						.																					.	.	.	.	.										.	.
Template SS confidence
		975	.	.	.	.		980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.		.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.						.	.	.	1040	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.					.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		V	P	A	E	D	R	F	L	S	A	L	A	G	E	N	D	P	E	A	K	R	K	I	I	G	R	V	F	V	E	V	F	D	E	E	A	L	K	L	E	D	V	K	W	L	A	Q	G	T	I	Y	.	.	.	.	P	D	V	I	E	S	A	A	S	A	T	G	K	A	H	V	I	K	S	H	H	N	V	G	G
Query Conservation																																																					.	.	.	.
Alig confidence																																																					.	.	.	.																					.	.
Template Conservation																																																																													.	.
Template Sequence		E	M	G	L	S	E	V	H	Q	V	L	T	L	N	R	L	R	H	R	V	R	L	R	T	D	G	G	L	K	T	G	R	D	I	V	I	A	A	M	L	G	A	E	E	F	G	I	G	T	A	S	L	I	A	M	G	C	I	M	V	R	Q	C	H	S	N	T	C	P	V	G	V	C	V	Q	.	.	D	D	K
Template Known Secondary structure														T	T	T		T	T	T	S						S	S			S										T	T		S													T							T	T	T	T			T	T	S	S	S			.	.		T	T
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		1046	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120			.	.	.
		364	.	.	.	.	.	370	.	.			.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.			.	.	.	.	.	400
Predicted Secondary structure											.	.																							.	.
Query SS confidence											.	.																							.	.
Query Sequence		L	P	K	E	M	K	M	G	L	.	.	V	E	P	L	K	E	L	F	K	D	E	V	R	K	I	G	L	E	L	G	L	P	.	.	Y	D	M	L	Y	R
Query Conservation											.	.																							.	.
Alig confidence											.	.																							.	.
Template Conservation
Template Sequence		L	R	Q	K	F	V	G	T	P	E	K	V	V	N	L	F	T	F	L	A	E	E	V	R	E	I	L	A	G	L	G	F	R	S	L	N	E	V	I	G	R
Template Known Secondary structure		G	G	G	S																											T		S		S	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		1124	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions