Job Description P04079 Confidence 100.00% Date Thu Jan 5 10:58:10 GMT 2012 Rank 3 Aligned Residues 474 % Identity 44% Template c3uowB_ PDB info PDB header:ligase Chain: B: PDB Molecule:gmp synthetase; PDBTitle: crystal structure of pf10_0123, a gmp synthetase from plasmodium2 falciparum Resolution 2.72 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	L	I	L	D	F	G	S	Q	Y	T	Q	L	V	A	R	R	V	R	E	L	G	V	Y	C	E	L	W	A	W	D	V	T	E	A	Q	I	R	D	F	N	P	S	G	I	I	L	S	G	G	P	E	S	T	T	E	E	N	S	P	R	A	P	Q	Y	V	F	E	A	G	V	P	V	F	G	V	C	Y	G
Query Conservation
Alig confidence																																		.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		K	I	L	V	L	N	F	G	S	Q	Y	F	H	L	I	V	K	R	L	N	N	I	K	I	F	S	E	T	K	D	Y	K	.	.	.	.	D	I	K	D	M	N	I	K	G	V	I	L	S	G	G	P	Y	S	E	V	F	.	.	.	.	.	.	.	E	Y	F	L	E	K	K	I	P	I	F	G	I	C	Y	G
Template Known Secondary structure								S			T	T											T	T										.	.	.	.			S	S	S											S						.	.	.	.	.	.	.						T	T							T
Template Predicted Secondary structure																																		.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	T	M	A	M	Q	L	G	G	H	V	E	A	S	N	E	R	E	F	G	Y	A	Q	V	E	V	V	N	D	S	A	L	V	R	G	I	E	D	A	L	T	A	D	G	K	P	L	L	D	V	W	M	S	H	G	D	K	V	T	A	I	P	S	D	F	I	T	V	A	S	T	E	S	C	P	F	A	I	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	Q	E	I	A	V	Q	M	N	Y	G	C	T	D	V	N	I	N	I	N	N	I	T	Y	C	A	M	D	L	Y	S	N	Y	K	L	M	N	C	C	L	F	E	N	I	K	S	D	I	T	T	V	W	M	N	H	N	D	E	V	T	K	I	P	E	N	F	Y	L	V	S	S	S	E	N	C	L	I	C	S	I
Template Known Secondary structure									T											G	G	G							T	T	G	G	G	S						G	G	G	T	T			S	S									S					S			T	T						B		S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	E	E	K	R	F	Y	G	V	Q	F	H	P	E	V	T	H	T	R	Q	G	M	R	M	L	E	R	F	V	R	D	I	C	Q	C	E	A	L	W	T	P	A	K	I	I	D	D	A	V	A	R	I	R	E	Q	V	G	D	D	K	V	I	L	G	L	S	G	G	V	D	S	S	V	T	A	M	L	L	H
Query Conservation
Alig confidence																																							.	.
Template Conservation																																							.	.
Template Sequence		Y	N	K	E	Y	N	I	Y	G	V	Q	Y	H	P	E	V	Y	E	S	L	D	G	E	L	M	F	Y	N	F	A	Y	N	I	C	K	C	K	.	.	F	D	P	I	R	Y	H	E	L	E	L	K	N	I	E	K	Y	K	H	D	H	Y	V	I	A	A	M	S	G	G	I	D	S	T	V	A	A	A	Y	T	H
Template Known Secondary structure				T	T	T	T					S	S	B	T	T	S	T	T	S	T	T											T	T	S				.	.															G	G	G	T	T	T									S	S
Template Predicted Secondary structure																																							.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		R	A	I	G	K	N	L	T	C	V	F	V	D	N	G	L	L	R	L	N	E	A	E	Q	V	L	D	M	F	G	D	H	.	F	G	L	N	I	V	H	V	P	A	E	D	R	F	L	S	A	L	A	G	E	N	D	P	E	A	K	R	K	I	I	G	R	V	F	V	E	V	F	D	E	E	A	L	K	L	E
Query Conservation																																		.
Alig confidence																																		.
Template Conservation
Template Sequence		K	I	F	K	E	R	F	F	G	I	F	I	D	N	G	L	L	R	K	N	E	A	E	N	V	Y	T	F	L	K	S	T	F	P	D	M	N	I	T	K	I	D	A	S	E	N	F	L	S	N	L	Q	G	V	T	D	P	E	Q	K	R	K	I	I	G	K	L	F	I	E	E	F	E	K	A	V	N	N	I	D
Template Known Secondary structure					G	G	G									S		S		T	T														T	T																T	T	T																									T
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		328	.	330			.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		D	V	K	.	.	W	L	A	Q	G	T	I	Y	P	D	V	I	E	S	A	A	S	A	T	G	K	A	H	V	I	K	S	H	H	N	V	G	G	L	P	K	E	M	K	M	G	L	V	E	P	L	K	E	L	F	K	D	E	V	R	K	I	G	L	E	L	G	L	P	Y	D	M	L	Y	R	H	P	F	P	G
Query Conservation					.	.
Alig confidence					.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	N	K	T	F	L	L	Q	G	T	L	Y	P	D	I	I	E	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	K	L	F	E	P	F	K	Y	L	F	K	D	D	V	K	T	L	S	R	E	L	N	L	P	E	E	I	T	N	R	H	P	F	P	G
Template Known Secondary structure			T	T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T	T												T	T	T													T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.																								.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	L	G	V	R	V	L	G	E	V	K	K	E	Y	C	D	L	L	R	R	A	D	A	I	F	I	E	E	L	R	K	A	D	L	Y	D	K	V	S	Q	A	F	T	V	F	L	P	V	R	S	V	G	V	M	G	D	G	R	K	Y	D	W	V	V	S	L	R	A	V	E	T	I	D	F	M	T	A	H	W
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.
Template Sequence		P	G	L	A	I	R	V	I	G	E	I	N	K	H	K	L	N	I	L	R	E	V	D	D	I	F	I	N	D	L	K	Q	Y	G	L	Y	N	Q	I	S	Q	A	F	A	V	L	L	S	S	K	S	V	G	.	.	.	.	.	.	.	Y	D	Y	V	C	V	L	R	A	V	K	T	S	S	F	M	T	A	N	W
Template Known Secondary structure		T	G	G	G	G	T	B		S	S																							T	T		G	G	G		S														.	.	.	.	.	.	.															T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.								.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	L	P	Y	D	F	L	G	R	V	S	N	R	I	I	N	E	V	N	G	I	S	R	V	V	Y	D	I	S	G	K	P	P	A	T	I	E	W	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Q	I	P	Y	D	I	L	D	K	I	T	T	R	I	L	S	E	V	K	G	V	N	R	I	L	Y	D	V	S	S	K	P	P	A	T	I	E	F	E
Template Known Secondary structure																					T	T											B	T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.