Job Description P04079 Confidence 97.64% Date Thu Jan 5 10:58:10 GMT 2012 Rank 95 Aligned Residues 89 % Identity 18% Template c3uk7B_ PDB info PDB header:transferase Chain: B: PDB Molecule:class i glutamine amidotransferase-like domain-containing PDBTitle: crystal structure of arabidopsis thaliana dj-1d Resolution 2.05 Å

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		6	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																																.	.	.	.	.	.	.	50	.
Predicted Secondary structure												.									.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.									.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	K	H	R	I	L	I	L	D	F	.	G	S	Q	Y	T	Q	L	V	.	.	A	R	R	V	R	E	L	G	V	Y	C	E	L	W	A	W	D	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	Q	I	R	D	F	N	P
Query Conservation												.									.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.									.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	S	R	T	V	L	I	L	C	G	D	Y	X	E	D	Y	E	V	X	V	P	F	Q	A	L	Q	A	F	G	I	T	V	H	T	V	C	P	G	K	K	A	G	D	S	C	P	T	A	V	H	D	F	C	G	H	Q	T	Y	F	E	S	R	G	H	N	F	T	L	N	A	T	F	D	E	V	D	L	S	K	Y
Template Known Secondary structure												T	T																T	T								T	T			T	T											S	S	S	S	S													S		G	G	G			G	G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		52	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		S	G	I	I	L	S	G	G	P	E	S	T	.	.	.	T	E	E	N	S	P	R	A	P	Q	Y	V	F	E	A	G	V	P	V	F	G	V	C	Y	G	M	Q	T	M	A	M	Q
Query Conservation														.	.	.
Alig confidence														.	.	.																				.
Template Conservation																																				.
Template Sequence		D	G	L	V	I	P	G	G	R	A	P	E	Y	L	A	L	T	A	S	V	V	E	L	V	K	E	F	S	R	S	G	K	P	I	.	A	S	I	H	G	Q	L	I	L	A	A	A
Template Known Secondary structure		S							B	T						T	T														T	T				.					T
Template Predicted Secondary structure																																				.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions