Job Description P04079 Confidence 27.12% Date Thu Jan 5 10:58:10 GMT 2012 Rank 379 Aligned Residues 75 % Identity 17% Template c3rotA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc sugar transporter, periplasmic sugar binding protein; PDBTitle: crystal structure of abc sugar transporter (periplasmic sugar binding2 protein) from legionella pneumophila Resolution 1.91 Å

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		7	.	.	10	.	.	.							.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.										.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure									.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Query Sequence		K	H	R	I	L	I	L	.	.	.	.	.	.	D	F	G	S	Q	Y	T	Q	L	V	A	R	R	V	R	E	L	G	V	Y	C	E	L	W	A	W	D	V	T	.	.	.	.	.	.	.	.	.	E	A	Q	I	R	D	F	N	P	S	G	I	I	L	S	G	G	P	E	S	T	T	E	E	N	S	P	R	A
Query Conservation									.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																																																																			.	.	.	.
Template Sequence		R	D	K	Y	Y	L	I	T	H	G	S	Q	D	P	Y	W	T	S	L	F	Q	G	A	K	K	A	A	E	E	L	K	V	D	L	Q	I	L	A	P	P	G	A	N	D	V	P	K	Q	V	Q	F	I	E	S	A	L	A	T	Y	P	S	G	I	A	T	.	.	.	.	T	I	P	S	D	T	A	F	S	K	S
Template Known Secondary structure										S				S																		T									S	S	S																T			S					.	.	.	.					S	S	T	T
Template Predicted Secondary structure																																																																			.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	Y	V	F	E	A	G	V	P	V	F	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	R	A	N	K	L	N	I	P	V	I	A	V
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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