Return to main results Retrieve Phyre Job Id

Job DescriptionP04079
Confidence36.44%DateThu Jan 5 10:58:10 GMT 2012
Rank293Aligned Residues65
% Identity18%Templatec3pfnB_
PDB info PDB header:transferaseChain: B: PDB Molecule:nad kinase; PDBTitle: crystal structure of human nad kinase
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30...... ...40.........50.........60.........70....
Predicted Secondary structure 



.......................



















Query SS confidence 


















. . . . . . . . . . . . . . . . . . . . . . .





































Query Sequence  QYTQLVARRVRELGVYCEL. . . . . . . . . . . . . . . . . . . . . . . WAWDVTEAQIRDFNPSGIILSGGPESTTEENSPRAPQY
Query Conservation      

 
 





  

....................... 
     
 
     








 

 
         
Alig confidence 


















.......................











.











.....







Template Conservation      

   
   
  
 

                                  .  



 




.....
 
 
   
Template Sequence  QPFKELCTHLXEENXIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISN. QIDFIICLGGDG. . . . . TLLYASSL
Template Known Secondary structure  TS
SS
STT

TTT


TT.T
SSSTT.....
Template Predicted Secondary structure 





























.




.....
Template SS confidence 















































































   120.........130.........140.........150.........160.........170... ......180..... ....190...
 
   75....80........
Predicted Secondary structure 




Query SS confidence 













Query Sequence  VFEAGVPVFGVCYG
Query Conservation 
    






 
Alig confidence 













Template Conservation        





 
Template Sequence  FQGSVPPVXAFHLG
Template Known Secondary structure 
SSS


SS
Template Predicted Secondary structure 







Template SS confidence 













   194.....200.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions