Job Description P04079 Confidence 94.54% Date Thu Jan 5 10:58:10 GMT 2012 Rank 114 Aligned Residues 88 % Identity 18% Template c3ot1B_ PDB info PDB header:structural genomics Chain: B: PDB Molecule:4-methyl-5(b-hydroxyethyl)-thiazole monophosphate PDBTitle: crystal structure of vc2308 protein Resolution 1.16 Å

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		8	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.																	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure										.									.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Query SS confidence										.									.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Query Sequence		H	R	I	L	I	L	D	F	.	G	S	Q	Y	T	Q	L	V	.	.	A	R	R	V	R	E	L	G	V	Y	C	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	A	W	D	V	T	E	A	Q	I	R	D	F	N	P	S	G	I	I	L	S	G	G	P	E	S	T	T	.	.	.	.
Query Conservation										.									.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Alig confidence										.									.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence		K	R	I	L	V	P	V	A	H	G	S	E	E	X	E	T	V	I	I	V	D	T	L	V	R	A	G	F	Q	V	T	X	A	A	V	G	D	K	L	Q	V	Q	G	S	R	G	V	W	L	T	A	E	Q	T	L	E	A	C	S	A	E	A	F	D	A	L	A	L	P	G	G	V	G	G	A	Q	A	F	A	D
Template Known Secondary structure										T	T																T	T								S	S	S		S					T	T	S						S			G	G	G			G	G	G		S																T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	N	S	P	R	A	P	Q	Y	V	F	E	A	G	V	P	V	F	G	V	C	Y	G	M	Q	T	M	A	M	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	A	L	L	A	L	I	D	A	F	S	Q	Q	G	K	L	V	A	A	I	A	T	P	A	L	V	F	A	K	Q
Template Known Secondary structure															T	T												T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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