Job Description P04079 Confidence 99.90% Date Thu Jan 5 10:58:10 GMT 2012 Rank 47 Aligned Residues 183 % Identity 20% Template c3nvaB_ PDB info PDB header:ligase Chain: B: PDB Molecule:ctp synthase; PDBTitle: dimeric form of ctp synthase from sulfolobus solfataricus Resolution 2.50 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.									.	.
Query SS confidence																														.	.	.	.	.									.	.
Query Sequence		D	F	G	S	Q	Y	T	Q	L	V	A	R	R	V	R	E	L	G	V	Y	C	E	L	W	A	W	D	V	.	.	.	.	.	T	E	A	Q	I	R	D	F	.	.	N	P	S	G	I	I	L	S	G	G	P	E	S	T	T	E	E	N	S	P	R	A	P	Q	Y	V	F	E	A	G	V	P	V	F	G	V	C
Query Conservation																														.	.	.	.	.									.	.
Alig confidence																														.	.	.	.	.									.	.
Template Conservation
Template Sequence		D	S	Y	I	S	I	K	E	A	I	Y	H	A	S	A	Y	I	G	V	R	P	K	L	I	W	I	E	S	T	D	L	E	S	D	T	K	N	L	N	E	I	L	G	N	V	N	G	I	I	V	L	P	G	F	G	S	R	G	A	E	G	K	I	K	A	I	K	Y	A	R	E	H	N	I	P	F	L	G	I	C
Template Known Secondary structure		S	T	T														T	T										G	G	G	G			S	S	S			T	T	T	S	S	S		S						S			S	S	T	T														T	T							T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100																															.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	M	Q	T	M	A	M	Q	L	G	G	H	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	S	N	E	R	E	F	G	Y	A	Q	V	E	V	V	N	D	S	A	L	V	R	G	I	E	D	A	L	T	A	D	G	K	P	L
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.
Template Sequence		F	G	F	Q	L	S	I	V	E	F	A	R	D	V	L	G	L	S	E	A	N	S	T	E	I	N	P	N	T	K	D	P	V	I	T	L	L	D	E	Q	K	N	V	T	Q	L	G	G	T	M	R	L	G	A	Q	K	I	I	L	K	E	G	T	I	A	Y	Q	L	Y	G	.	.	.	.	.	.	.	K	K	V
Template Known Secondary structure															T	T			T	T				T	T	T		T	T		S							B		T	T	S		B		S	S															T	T	S							T	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.								.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure															.	.	.	.	.	.																												.													.
Query SS confidence															.	.	.	.	.	.																												.													.
Query Sequence		L	D	V	W	M	S	H	G	D	K	V	T	A	.	.	.	.	.	.	I	P	S	D	F	I	T	V	A	S	T	E	S	C	P	F	A	I	M	A	N	E	E	K	R	F	Y	.	G	V	Q	F	H	P	E	V	T	H	T	R	.	Q	G	M	R	M	L	E	R	F	V	R	D	I	C	Q
Query Conservation															.	.	.	.	.	.																												.													.
Alig confidence															.	.	.	.	.	.																												.													.
Template Conservation
Template Sequence		V	Y	E	R	H	R	H	R	Y	E	V	N	P	K	Y	V	D	I	L	E	D	A	G	L	V	V	S	G	I	S	E	N	G	L	V	E	I	I	E	L	P	S	N	K	F	F	V	A	T	Q	A	H	P	E	F	K	S	R	P	T	N	P	S	P	I	Y	L	G	F	I	R	A	V	A	S
Template Known Secondary structure																							T	T								T	T	S								T	T	S	S	S					S	S		G	G	G	G		B	T	T	B													T
Template Predicted Secondary structure
Template SS confidence
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions