Job Description P04079 Confidence 52.35% Date Thu Jan 5 10:58:10 GMT 2012 Rank 215 Aligned Residues 61 % Identity 15% Template c3nbmA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pts system, lactose-specific iibc components; PDBTitle: the lactose-specific iib component domain structure of the2 phosphoenolpyruvate:carbohydrate phosphotransferase system (pts) from3 streptococcus pneumoniae. Resolution 1.30 Å

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		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250						.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.													270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	I	L	G	L	S	G	G	V	D	S	S	V	T	A	M	L	L	H	R	A	.	.	.	.	.	I	G	K	N	L	T	C	V	F	V	D	N	G	L	L	R	L	N	E	.	.	.	.	.	.	.	.	.	.	.	.	A	E	Q	V	L	D	M	F	G	D	H	F	G	L	N	I	V	H	V	P
Query Conservation																								.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	L	V	L	C	A	G	S	G	T	S	A	Q	L	A	N	A	I	N	E	G	A	N	L	T	E	V	R	V	I	A	N	S	G	A	Y	G	A	H	Y	D	I	X	G	V	Y	D	L	I	I	L	A	P	Q	V	R	S	Y	Y	R	E	X	K	V	D	A	E	R	L	G	I	Q	I	V	A	T	R
Template Known Secondary structure								S	S	S	S																	T		S								T	T	S		T	T	T	G	G	G		S						G	G	G	G	G	G									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions