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Job DescriptionP04079
Confidence96.58%DateThu Jan 5 10:58:10 GMT 2012
Rank103Aligned Residues91
% Identity13%Templatec3n7tA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:macrophage binding protein; PDBTitle: crystal structure of a macrophage binding protein from coccidioides2 immitis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10..... ....20... ......30.........
Predicted Secondary structure 




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Query Sequence  IHKHRILILDF. . . . . . . . . . . . GSQYTQLV. . ARRVRELGVYCELWAW. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LPRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETGTFGWDEHSLTQEYLSKEDEKVLHSEHNHF
Template Known Secondary structure 

S





B
STTS
B

B
TT
SSS


B
SGGGSGGG

T
SS
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   40.........50.........60.. .......70.........80.........90.....
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Query Sequence  . . . . . . . DVTEAQIRDFNPSGIILSGGPES. . . . TTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQ
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Template Conservation            
  
   




 



 
   

     
  

       
 






   
  
Template Sequence  MEKMNKQVFKAGDLAPHDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLPGI
Template Known Secondary structure 

GGGS
GGG
S

STTGGG
TT
TTGGGGGGG
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   84.....90.........100.........110.........120.........130.........140.........150
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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