Job Description P04079 Confidence 54.64% Date Thu Jan 5 10:58:10 GMT 2012 Rank 201 Aligned Residues 75 % Identity 11% Template c3kbqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein ta0487; PDBTitle: the crystal structure of the protein cina with unknown function from2 thermoplasma acidophilum Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.										.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.																		.																.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.																		.																.	.	.	.	.	.
Query Sequence		H	R	I	L	I	L	D	F	G	S	.	.	.	.	.	.	.	.	.	Q	Y	T	Q	L	V	A	R	R	V	R	E	L	G	V	Y	C	.	E	L	W	A	W	D	V	T	E	A	Q	I	R	D	F	.	.	.	.	.	.	N	P	S	G	I	I	L	S	G	G	P	E	S	T	T	E	E	N	S	P	R	A
Query Conservation												.	.	.	.	.	.	.	.	.																		.																.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.																		.																.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	A	S	V	I	T	V	G	N	E	I	L	K	G	R	T	V	N	T	N	A	A	F	I	G	N	F	L	T	Y	H	G	Y	Q	V	R	R	G	F	V	V	M	D	D	L	D	E	I	G	W	A	F	R	V	A	L	E	V	S	D	L	V	V	S	S	G	G	L	G	P	T	F	D	D	M	T	V	E	G
Template Known Secondary structure															T	T	S	S															T	T											S																	S						S			S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		72	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	Y	V	F	E	A	G	V	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	K	C	I	G	Q	D	L	R	I
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions