Job Description P04079 Confidence 99.74% Date Thu Jan 5 10:58:10 GMT 2012 Rank 66 Aligned Residues 150 % Identity 17% Template c3k32D_ PDB info PDB header:transferase Chain: D: PDB Molecule:uncharacterized protein mj0690; PDBTitle: the crystal structure of predicted subunit of trna2 methyltransferase from methanocaldococcus jannaschii dsm Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	L	G	L	S	G	G	V	D	S	S	V	T	A	M	L	L	H	R	A	I	G	K	N	L	T	C	V	F	V	D	N	G	L	L	R	L	N	E	A	E	Q	V	L	D	M	F	G	D	H	F	G	L	N	I	V	H	V	P	A	E	D	R	F	L	S	A	L	A	G	E	N	D	P	E	A	K	R	K
Query Conservation
Alig confidence																							.														.	.	.
Template Conservation																							.														.	.	.
Template Sequence		V	H	V	L	F	S	G	G	K	D	S	S	L	S	A	V	I	L	K	K	L	.	G	Y	N	P	H	L	I	T	I	N	F	G	V	.	.	.	I	P	S	Y	K	L	A	E	E	T	A	K	I	L	G	F	K	H	K	V	I	T	L	D	R	K	I	V	E	K	A	A	D	X	I	I	E	H	K	Y	P	G
Template Known Secondary structure								S	S													T	.	T											S	S	.	.	.	S		T	T											T																								S	S	S
Template Predicted Secondary structure																							.														.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	G	R	V	F	V	E	V	F	D	E	E	A	L	K	L	E	D	V	K	W	L	A	Q	G	T	I	Y	P	D	V	I	E	S	A	A	S	A	T	G	K	A	H	V	I	K	S	H	H	N	V	G	G	L	P	K	E	M	K	M	G	L	V	E	P	L	K	E	L	F	K	D	E	V	R	K	I	G	L
Query Conservation
Alig confidence																		.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	I	Q	Y	V	H	K	T	V	L	E	I	L	A	D	.	.	E	Y	S	I	L	A	D	G	T	R	R	D	D	R	V	P	K	L	S	Y	S	E	I	Q	.	.	.	.	.	.	.	.	.	.	.	S	L	E	X	R	K	N	I	Q	Y	I	T	P	L	X	G	F	G	Y	K	T	L	R	H	L	A	S
Template Known Secondary structure																T	T	.	.	T		S								T	T			S	S									.	.	.	.	.	.	.	.	.	.	.													G	G	G	G
Template Predicted Secondary structure																		.	.																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.												.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	G	L	P	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	F	I	L	E	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions