Job Description P04079 Confidence 30.33% Date Thu Jan 5 10:58:10 GMT 2012 Rank 341 Aligned Residues 75 % Identity 15% Template c3iz6A_ PDB info PDB header:ribosome Chain: A: PDB Molecule:40s ribosomal protein sa (s2p); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		H	K	H	R	I	L	I	L	D	F	G	S	Q	Y	T	Q	L	V	A	R	R	V	R	E	L	G	V	Y	C	E	L	W	A	W	D	V	T	.	.	.	.	E	A	Q	I	R	D	F	N	P	S	G	I	I	L	S	G	G	P	E	S	T	T	E	E	N	S	P	R	A	P	Q	Y	V	F	E	A	G	V	P
Query Conservation																																							.	.	.	.
Alig confidence																																							.	.	.	.																	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.
Template Sequence		N	P	Q	D	I	I	V	Q	S	A	R	P	Y	G	Q	R	A	V	L	K	F	A	Q	Y	T	G	A	H	A	I	A	G	R	H	T	P	G	T	F	T	N	Q	L	Q	T	S	F	S	E	P	R	L	L	I	L	T	D	.	.	.	.	.	.	P	R	T	D	H	Q	P	I	K	E	S	A	L	G	N	I	P
Template Known Secondary structure		S	S									S															T						S				T	T	T	T	T	T	T	T	T	S		S	S			S					S		.	.	.	.	.	.	T	T	T	T											T
Template Predicted Secondary structure																																																											.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		82	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	G	V	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	A	F	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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